Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2498g00009 ATGTTGAATTTTCAATGTATTTGCTTTCTTCTTGTTCTTCTTTTCCTTCTGCAGAATCCTTCTGCAACATTGTGCCATACCAAGGGACTTAGACCCGGCCGCCAGCGTTTTCCGGGCCTTGGGTTATCCATCAACAGGACCCAAGTCCAGAATTCAGAGCAGCAATTCATGAAATGGGTTAACTTTGTTGGTAGCCTCAAGCATTCTGTCTTTAAGACTGCAAAAAACAAGCTTTTTCCTTCTCATACACTTCACGTCTCCAAGAATCCTGCCGTAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTGGCATCAATCTCGTGAGAGTGGTAATTAAGGTTCATGCAGGTGTTTACACTGAGAAAGTGTACATCCCTCCCATGAAATCCTTCATAACCATAGAAGGAGCAGGAGCAGATAGCACCATAGTTCAATGGGGTGACACAGCTCAAACACCAGGTCCCAGAGGACAGCCATTAGGAACATATGGTTCTGCAACATTTGGAGTGAACTCACCTTATTTCATCGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCAGCACCAGGAGCGGTAGGGAAGCAAGCCGTGGCATTAAGGGTATCAGCAGACACAGCATCATTCTACGGATGCAAATTCCTAGGAGCACAGGACACATTATATGACCATGAGGGTAGACATTATTACAAGGACTGTTACATTGAAGGCTCTGTGGATTTCATATTTGGGAACGCCCTGTCTCTATTTGAGGGATGTCACGTGCATGCGATAGCACAGAACATAGGGGCCTTAACAGCACAAGGAAGAAGCAGCATGTTGGAGGACACAGGGTTCTCATTTGTGCACTGTAAAGTCACAGGTTCAGGAGCACTGTACCTTGGAAGGGCTTGGGGTCCATTTTCTCGTGTGGTTTTTGCTTACACTTACATGGACAACATCATCCTTCCCAAGGGCTGGTATAACTGGGGCGACCCTAACCGAGAAATGACAGTATTTTATGGACAATACAAGTGCACAGGGCAAGGAGCTAGCTTCGCAGGCAGAGTCTCATGGTGTAAAGAACTAACCGATGAGGAAGCTAAGCCTTTTATTTCCCTTAGCTTCATTGATGGCGATGAGTGGACCAAATTATAG 1149 0.4534 MLNFQCICFLLVLLFLLQNPSATLCHTKGLRPGRQRFPGLGLSINRTQVQNSEQQFMKWVNFVGSLKHSVFKTAKNKLFPSHTLHVSKNPAVADFATIQEAIDSLPGINLVRVVIKVHAGVYTEKVYIPPMKSFITIEGAGADSTIVQWGDTAQTPGPRGQPLGTYGSATFGVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRVSADTASFYGCKFLGAQDTLYDHEGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNIGALTAQGRSSMLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIILPKGWYNWGDPNREMTVFYGQYKCTGQGASFAGRVSWCKELTDEEAKPFISLSFIDGDEWTKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2498g00009 382 SUPERFAMILY Pectin lyase-like 80 381 IPR011050 -
Pral2498g00009 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Pral2498g00009 382 Gene3D - 80 382 IPR012334 -
Pral2498g00009 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 380 - -
Pral2498g00009 382 FunFam Pectinesterase 80 382 - -
Pral2498g00009 382 Pfam Pectinesterase 93 377 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2498g00009 Pral-Chr2498 144355 149008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2498g00009 1 379 Carbohydrate Esterase AT5G47500 41.842 4.55e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2498g00009 K01051 - qsa:O6P43_007857 650.588