Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2498g00002 ATGAGAAATTCAACTCCATTGTTCTGTCTCCATGTCCCCCTTAATTACTTCTTCTTCCTTCTCTTTCTGAGCTGTGCGAATTCTCAGTCCGAACTCTATGATCAAGAACATGGAGTTCTGCTAAGGATGAAACAGTACTTTAAAAGCCCATCTTCTCTCAGTCACTGGACACAATCAGATTCATTTCATTGTTCATGGAAAGAGATCACCTGCGACAATAACTCTGTTACAGGGCTGGCTCTAAAAGAGATCAATATCAGACAACCGATACCAACTTTCATCTGTGAGCTTAAAAACCTCACTTCTATTGATTTTCAATGGAATTTCATTCCTGGGGAGTTCCCAACGTATCTCTACAACTGTTCCAAGCTGGAGCACCTGGACCTTTCTAATAATTACTTTGTTGGTAAGGTTCCAGAGGACATTGACAGATTGGCTAGCCTGCGTTTTCTTAACCTCGGCGGCAACAACTTTTCCGGTGAGATTCCGGCGAGCGTTACGCGGTTAAAAGAGCTCACAAGTCTTCAGCTTAGTCTCTGTCTATTTAATGGTAGCGTCCCAAGTGACATAGGCGACTTATCCAATCTTGAAGTCTTGAATTTGGGCTTCAACCCATTCTCTTCTTCAAAGTTTCCTTCTAGCTTCACCAACCTCACGAAGTTGAAGGATTTTGTGATGTCTGATTGCAACTTGATTGGTGAAATCCCAGAAAGTATTGGGAACCTGGTGGCCTTAGAGATGTTGGATTTATCCCAAAATCAGTTAAGCGGCAAAATTCCAAGTAGTTTGTTTATGCTGAAGAATCTCAGCAGAATGTTTCTTTCAAGGAATCAGCTTGATGGGGAGCTACCTCAAGTGATTGAAGCTTTATACTTGACCATCATTGATCTTGCTCAGAACAAGCTTACAGGAAAGATACCTAATGGCTTTGGAAATCTCCATAAGCTAACTGGTATGAACTTGGGCCTTAATCAATTATCAGGTGAGATTCCCGAAAGCCTCGGCCGTCTTCAATCTATAATGGATTTCAGCGTCTTCTTCAACCATTTATCAGGTAACATTCCTCCAGAGTTTGGGCTCCATTCAAACCTTAGAAGATTTGAACTTGCATCAAACAGTTTAACAGGCAGTCTTCCTCAGAATTTGTGTTACCATGGCAGTTTATTTCGGTTAACAGCTTATGACAACAAACTCAGTGGGGAATTACCGAAATCATTAGGAAATTGTAGCAGCTTGCTCGAGTTGAGGGTTGACAATAATGAGCTCTCTGGTGAAATTCCTAGCAGCCTTTGGGCGTCTCAGCATTTGTCACTTTTCATGATCAATGACAATAAGTTCACAGGTGAGCTTCCTAAAACACTGCCTGTGAATGTTTCACGGATGGTAATTAGTTACAATCAGTTTTCCGGTAGGATTCCAGCGGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAGTGCAAGCAGCAACCTCTTTAACGGAAGTATTCCACAAGAGCTAACCAGTCTTTCCCAGCTAGCAACTTTGCTTCTTGATCAGAACAAACTTTCTGGGCCGCTTCCGTCTAAAATCATATCATGGAAATCTCTAAGAATTCTAAACTTGAGCCAAAATCAACTTTCTGGGGAAATCCCAGATTCAGTTACTCGTTTGGTTGACCTTGCACAACTAGACTTGTCGGAAAACCAATTATCTGGCCAAATTCCATCTCAACTAGGCCTTTTGAGAAACTCTGATCTCAACCTTTCCTCTAATCATTTGACTGGGAAGATTCCTAGTGAATTCGAAAATATTGCTTATGCCACCAACTTTTTGAACAATCCTGGCCTTTGTGCTAACACAGATGGATTAAACCTTAAATTGTGCAATTCTGATTCTGTCCCTCAGAAGTCAAGCAAACGCTCATCCATGTCTCTTGCTTTGATCATAGGCCTTGCTACAGTAGCCTCCATAGCAGTTTCCTTGTTATCACTTTTCATGATGAAATTCTACCTAAAGAGAAAGCAAGAGTTGGACACTTCATGGAAGTTGACTTCCTTCCAGAAGCTAACTTTCACAGAATCAAAGATTGTCTCATCCTTGACAGACCATAACATCATAGGCAGAGGAGGGTACGGTACAGTGTACCTTGTCGCTGTCAATGATAAAGACTATGTTGCTGTGAAGAGGATAAGCAATAACAGGAAGTTAGATCATAAGCTTGAGAATGCATTTCTTGCAGAAGTTGAAATCTTAGGCACTATTCGTCACATCAACATAGTGAAGTTACTATGTTGTATATCTAATGAGGATTCTTTACTTCTTGTATATGAGTATTTGGAACATCGTAGTCTTGATAAGTGGCTGCACAAAAAGAATGGCTCATTGGGTTTGTCATCTGCAGTTCATAGTATTATTCTTGACTGGCCAAGGAGATTGCACATAGCAATTGGGATTGTACAAGGTTTGAGCTACATGCATCATGATAACTCACCGCCCATTATTCATCGTGATGTCAAAGTAAGTAACATTCTCTTGGACTCTCAGTTCAATGCAAAAGTTGCAGATTTTGGCCTTGCCAAGATGTTGATCAAACCAGGACAACTTGATACCATGTCATGTGTGGTTGGCTCTTTCGGTTACATTGCTCCAGAATATGCTCAAACGAAAAGAGTGAATGAAAAGGTTGATGTATATGGCTTTGGGGTTATCCTTCTGGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAGTACTCGTCTCTTGCAGAATGGGCATGGCGTCAGATTCAACTAGGAAACAACATAGAAAAAGTTCTAGACGAAGATGTTAAGGAAACTTCATACTTGGAGGAGATGTGCGGTGTCTTCAAGCTTGGGGTGATGTGTACAGCCAAAGAGCCAGCTGCTAGGCCTTCCATGAAGGAGGTTCTGAATATATTGCTCCGCTTGAAAGAACCATGTGGTTATGTAGAAATGAATTTTGGTCATTTAGATGATGTTCCTCTCCTGAAGAATTCCAAAAGGGAGAGTAGGTTAGATATTGATAATGATAGCTAA 3042 0.4096 MRNSTPLFCLHVPLNYFFFLLFLSCANSQSELYDQEHGVLLRMKQYFKSPSSLSHWTQSDSFHCSWKEITCDNNSVTGLALKEINIRQPIPTFICELKNLTSIDFQWNFIPGEFPTYLYNCSKLEHLDLSNNYFVGKVPEDIDRLASLRFLNLGGNNFSGEIPASVTRLKELTSLQLSLCLFNGSVPSDIGDLSNLEVLNLGFNPFSSSKFPSSFTNLTKLKDFVMSDCNLIGEIPESIGNLVALEMLDLSQNQLSGKIPSSLFMLKNLSRMFLSRNQLDGELPQVIEALYLTIIDLAQNKLTGKIPNGFGNLHKLTGMNLGLNQLSGEIPESLGRLQSIMDFSVFFNHLSGNIPPEFGLHSNLRRFELASNSLTGSLPQNLCYHGSLFRLTAYDNKLSGELPKSLGNCSSLLELRVDNNELSGEIPSSLWASQHLSLFMINDNKFTGELPKTLPVNVSRMVISYNQFSGRIPAGISSMKNLVVFSASSNLFNGSIPQELTSLSQLATLLLDQNKLSGPLPSKIISWKSLRILNLSQNQLSGEIPDSVTRLVDLAQLDLSENQLSGQIPSQLGLLRNSDLNLSSNHLTGKIPSEFENIAYATNFLNNPGLCANTDGLNLKLCNSDSVPQKSSKRSSMSLALIIGLATVASIAVSLLSLFMMKFYLKRKQELDTSWKLTSFQKLTFTESKIVSSLTDHNIIGRGGYGTVYLVAVNDKDYVAVKRISNNRKLDHKLENAFLAEVEILGTIRHINIVKLLCCISNEDSLLLVYEYLEHRSLDKWLHKKNGSLGLSSAVHSIILDWPRRLHIAIGIVQGLSYMHHDNSPPIIHRDVKVSNILLDSQFNAKVADFGLAKMLIKPGQLDTMSCVVGSFGYIAPEYAQTKRVNEKVDVYGFGVILLELTTGKEANYGDEYSSLAEWAWRQIQLGNNIEKVLDEDVKETSYLEEMCGVFKLGVMCTAKEPAARPSMKEVLNILLRLKEPCGYVEMNFGHLDDVPLLKNSKRESRLDIDNDS 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2498g00002 1013 SMART serkin_6 694 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2498g00002 1013 FunFam Receptor-like protein kinase HSL1 674 772 - -
Pral2498g00002 1013 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 395 626 - -
Pral2498g00002 1013 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Pral2498g00002 1013 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Pral2498g00002 1013 Pfam Leucine Rich Repeat 529 548 IPR001611 GO:0005515
Pral2498g00002 1013 Pfam Leucine Rich Repeat 195 218 IPR001611 GO:0005515
Pral2498g00002 1013 FunFam Receptor-like protein kinase HSL1 isoform A 33 184 - -
Pral2498g00002 1013 ProSiteProfiles Leucine-rich repeat profile. 529 551 IPR001611 GO:0005515
Pral2498g00002 1013 Gene3D Ribonuclease Inhibitor 352 630 IPR032675 -
Pral2498g00002 1013 FunFam Kinase family with leucine-rich repeat domain-containing protein 773 987 - -
Pral2498g00002 1013 SUPERFAMILY L domain-like 44 290 - -
Pral2498g00002 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Pral2498g00002 1013 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 363 975 - -
Pral2498g00002 1013 ProSiteProfiles Protein kinase domain profile. 694 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2498g00002 1013 Gene3D Transferase(Phosphotransferase) domain 1 773 986 - -
Pral2498g00002 1013 Pfam Protein kinase domain 696 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2498g00002 1013 SUPERFAMILY RNI-like 295 598 - -
Pral2498g00002 1013 Pfam Leucine rich repeat N-terminal domain 38 72 IPR013210 -
Pral2498g00002 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 287 382 - -
Pral2498g00002 1013 SMART LRR_typ_2 313 337 IPR003591 -
Pral2498g00002 1013 SMART LRR_typ_2 551 575 IPR003591 -
Pral2498g00002 1013 SMART LRR_typ_2 242 266 IPR003591 -
Pral2498g00002 1013 SMART LRR_typ_2 193 217 IPR003591 -
Pral2498g00002 1013 SMART LRR_typ_2 503 527 IPR003591 -
Pral2498g00002 1013 SMART LRR_typ_2 145 169 IPR003591 -
Pral2498g00002 1013 PRINTS Leucine-rich repeat signature 245 258 - -
Pral2498g00002 1013 PRINTS Leucine-rich repeat signature 551 564 - -
Pral2498g00002 1013 ProSitePatterns Protein kinases ATP-binding region signature. 700 722 IPR017441 GO:0005524
Pral2498g00002 1013 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 189 286 - -
Pral2498g00002 1013 Gene3D Ribonuclease Inhibitor 25 84 IPR032675 -
Pral2498g00002 1013 Gene3D Ribonuclease Inhibitor 85 351 IPR032675 -
Pral2498g00002 1013 Gene3D Phosphorylase Kinase; domain 1 664 772 - -
Pral2498g00002 1013 SUPERFAMILY Protein kinase-like (PK-like) 685 975 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2498g00002 Pral-Chr2498 39523 43235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2498g00002 36 975 Receptor kinase-like Gene Family AT5G25930 50.842 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2498g00002 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2498g00002 - - gmx:100785907 1257.28