Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2497g00013 ATGGGGTTATGCTTCAGCAAATCCTCCCCTGATTCGCCAGCCCATTGTCACTACCAACAGCTTCCAAAGAGAAACCAACATGCTCCTCATCCCGCCACGCCCTCCGCCTCCCCCTCTTCCTCTTCCTCTTCCTCCCACCCTCAACTCGGTCCCATTCTGGGCAAACCGTATTTTGACATCAAAACACACTACACTCTGGACAAAGAGTTAGGAAGGGGCCAATTCGGCACCACTTATCTCTGCACCGAAAAGCTCACCGGACTCAAGTACGCTTGTAAGTCCATATCAAGGAGAAAGATGAGCAGCCGGAAGGGAATCGACGATGTGAAGAAGGAAATTATGATCCTGCAGCACCTGACGGGGCAGCCCAACATAGTGGAATTCAAGGGAGCTTACGAGGACTGGCATCACGTGCATTTGGTTATGGAGTTGTGTTCCGGCGGGGAGCTTTTTGATCGCATTATTGCCAGAGGGGTTTACTGCGAGGACGAAGCTGCCGTCATATTCAGGCAAGTCGTCAACGTGGTTCACGTTTGTCATTTCATGGGGGTGATGCATAGGGACCTTAAGCCCGAAAATTTCTTGTTGGCCACAAGGCACCCCAATTCTCCCTTGAAAGCCATGAATTTTGGCCTCTCTGTCTTCATTGAGCCAGGTAAAGAGTATAAGGAAGTCGTGGGAAGTGCGTACTATATGGCCCCGGAGGTTCTAAGACGGAATTATGGAAAAGAGATAGATGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTTAGTGGGGTGCCTCCGTTTTGGGCTGGGAACGAGAAAGGCATATTTGATGCTGTTCTGGAAGGCAAACTGGATCTTGAAAGCCAACCATGGCCTTCTATTTCAGCTGCTGCCAAGGATTTGATCAGAAAAATGTTGGCATATGATCCCAAGAAACGCATCACAGCCACTGATGCCCTTGAACATCCATGGATGAAGGTGGGTGGTCAATCATCTGACAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAAATGAAGAAACTTGCCCTGAAGGTAATAGCACAAAACCTATCAGAGGAAGACATCAAGGGCTTGAAACAAATGTTCCACAATATGGATACAGATAACAGTGGCACGATCACACTTGAAGAACTCAGAGCTGGATTGTCCAAATTGGGATCCAAACTTAACGAATCTGAAATACGGCAGTTGATGGATGCTGCTGATGTTGACAAGAATGGAACTATTGATTATTATGAATTCATAACTGCCACCATGCATCGGCACAGACTTGAGAAGGAAGAGAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGTGGACATATCACGAGAGAGGAGCTTAGGCAGGCATTGACTGAATACGGAATGGGGGATGAAGCCACGATAGATGAAGTGATCGACGATGTGGACACTGATAAAGATGGCAGGATCAGTTACGAGGAGTTTGTGGCTATGATGAAGAACGCGGGATGA 1518 0.4717 MGLCFSKSSPDSPAHCHYQQLPKRNQHAPHPATPSASPSSSSSSSHPQLGPILGKPYFDIKTHYTLDKELGRGQFGTTYLCTEKLTGLKYACKSISRRKMSSRKGIDDVKKEIMILQHLTGQPNIVEFKGAYEDWHHVHLVMELCSGGELFDRIIARGVYCEDEAAVIFRQVVNVVHVCHFMGVMHRDLKPENFLLATRHPNSPLKAMNFGLSVFIEPGKEYKEVVGSAYYMAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAGNEKGIFDAVLEGKLDLESQPWPSISAAAKDLIRKMLAYDPKKRITATDALEHPWMKVGGQSSDKPIDSAVLIRMKQFRAMNKMKKLALKVIAQNLSEEDIKGLKQMFHNMDTDNSGTITLEELRAGLSKLGSKLNESEIRQLMDAADVDKNGTIDYYEFITATMHRHRLEKEENLFKAFQYFDKDNSGHITREELRQALTEYGMGDEATIDEVIDDVDTDKDGRISYEEFVAMMKNAG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2497g00013 505 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Pral2497g00013 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pral2497g00013 505 ProSiteProfiles EF-hand calcium-binding domain profile. 472 505 IPR002048 GO:0005509
Pral2497g00013 505 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Pral2497g00013 505 SMART serkin_6 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2497g00013 505 MobiDBLite consensus disorder prediction 1 48 - -
Pral2497g00013 505 FunFam calcium-dependent protein kinase 1 150 329 - -
Pral2497g00013 505 Pfam Protein kinase domain 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2497g00013 505 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Pral2497g00013 505 ProSiteProfiles EF-hand calcium-binding domain profile. 437 471 IPR002048 GO:0005509
Pral2497g00013 505 Coils Coil 387 407 - -
Pral2497g00013 505 Gene3D Transferase(Phosphotransferase) domain 1 150 329 - -
Pral2497g00013 505 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2497g00013 505 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Pral2497g00013 505 SMART efh_1 476 504 IPR002048 GO:0005509
Pral2497g00013 505 SMART efh_1 369 397 IPR002048 GO:0005509
Pral2497g00013 505 SMART efh_1 405 433 IPR002048 GO:0005509
Pral2497g00013 505 SMART efh_1 441 469 IPR002048 GO:0005509
Pral2497g00013 505 CDD STKc_CAMK 63 321 - -
Pral2497g00013 505 FunFam Calcium-dependent protein kinase 1 330 505 - -
Pral2497g00013 505 Gene3D - 330 504 - -
Pral2497g00013 505 SUPERFAMILY Protein kinase-like (PK-like) 62 323 IPR011009 -
Pral2497g00013 505 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Pral2497g00013 505 PANTHER SERINE/THREONINE-PROTEIN KINASE 59 497 - -
Pral2497g00013 505 MobiDBLite consensus disorder prediction 30 48 - -
Pral2497g00013 505 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Pral2497g00013 505 Gene3D Phosphorylase Kinase; domain 1 66 149 - -
Pral2497g00013 505 FunFam Calcium-dependent protein kinase 1 66 149 - -
Pral2497g00013 505 SUPERFAMILY EF-hand 361 501 IPR011992 -
Pral2497g00013 505 Pfam EF-hand domain pair 370 430 IPR002048 GO:0005509
Pral2497g00013 505 Pfam EF-hand domain pair 439 502 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2497g00013 Pral-Chr2497 62834 66761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2497g00013 10 504 EF-hand Containing Proteins AT3G20410 66.667 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral2497g00013 Pkinase 6.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2497g00013 K13412 - qsa:O6P43_018724 746.888