Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2496g00010 ATGAGGAAACCTTTCTGTGAGAAGGCGGTTTTGAACAGAGGAGCTTGGTCCAAACAAGAAGATCAGAAACTCATTGATCATATCAACAAACATGGCGAGGGTTCCTGGCGTATCCTCCCTCAAGCTGCTGGTTTACTTCGCTGCGGCAAAAGTTGTAGGCTGAGATGGATAAACTACCTGAGGCCAGACCTTAAAAGAGGCAAGTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCCCTCCTAGGAAACCGGTGGTCACTGATAGCCGGAAGATTACCAGGAAGGACAGATAATGAGGTGAAGAACTATTGGAACTCTCATCTGAGAAAAAAGCTCATAAACAAAGGAATTGATCCGACCAATCATCGGTTAACTCCAAATCCGCCATTAATGTCTGGAAGCTCAGCATCATCATCATATAATAATAGTGCCAAGAATAATGATGAGCCAATTACAAAACCTTATTATGTTTCTGATAACAACTCCAACTGTGATCAAGTCTCAGATGCAGCGAGTGGTTTGAGAAGAAGAATCATCTTGCATACCTGA 558 0.4265 MRKPFCEKAVLNRGAWSKQEDQKLIDHINKHGEGSWRILPQAAGLLRCGKSCRLRWINYLRPDLKRGKFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRKKLINKGIDPTNHRLTPNPPLMSGSSASSSYNNSAKNNDEPITKPYYVSDNNSNCDQVSDAASGLRRRIILHT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2496g00010 185 Gene3D - 13 65 - -
Pral2496g00010 185 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pral2496g00010 185 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Pral2496g00010 185 Gene3D - 67 130 - -
Pral2496g00010 185 CDD SANT 68 111 IPR001005 -
Pral2496g00010 185 MobiDBLite consensus disorder prediction 128 161 - -
Pral2496g00010 185 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pral2496g00010 185 CDD SANT 15 60 IPR001005 -
Pral2496g00010 185 SMART sant 12 62 IPR001005 -
Pral2496g00010 185 SMART sant 65 113 IPR001005 -
Pral2496g00010 185 FunFam MYB-related transcription factor 12 65 - -
Pral2496g00010 185 FunFam MYB transcription factor 67 128 - -
Pral2496g00010 185 MobiDBLite consensus disorder prediction 120 161 - -
Pral2496g00010 185 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pral2496g00010 185 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 150 - -
Pral2496g00010 185 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pral2496g00010 185 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pral2496g00010 185 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2496g00010 Pral-Chr2496 89736 90955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2496g00010 2 155 MYB Transcription Factor Family AT4G38620 66.234 6.62e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2496g00010 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2496g00010 K09422 - jre:109008155 255.373