Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral248g00006 ATGATCAAGCAAGACTCGAAAAGTTTCTGGCGGATTATGATGCACTCAAGCCCAAGATTCTCGTATGCTGATATAAAAAGAATTACAAATCATTTCAAGAATAAATTAGGTGAAGGAGCTCATGGAACTGTGTTTAAAGGTAAGCTATCTACTGATATTCAAGTGGCTGTCAAAGTACTCAATAATTCAGAAATGACGGTAAGGGCTTCATGTATGAAGTGGGAACCATGGGCAAAATTCATCACATCAACGTTGTTCGTCTGCTGGGCTTTTGTGCTGACGGTTTTCATCGTGCTCTTGTTTGAGTTTTTCTCAAATGGTTCCCTACAAAAGTTCATATCTTCTCCAGACGACAAAGAAAATTTCCTTGGATGGTCGAAGCTACAAGAAAAAGCTTTGTCTATAGCTAAAGGGATCGAATATCTTCATCAAGGTTGTGATTATAGGATTCTTCACTTTGACATCAATCCCCGCAATGTGTTGTTAGATCAAAATTTGAGTCCCAAAATTTCTCATCTTGGTTTAGCTAAATTGTGTCCTAAAAATCAAAATACGGTGTCAATGACAGCAGCAAGGGGAACCCTTGGATACATTGCACTTGAAGTTTTCTCTCGAAATTTTGAAAATGTGTCATACAAACCAGATATTTACAGTTATAGAATACTGCTCCTAGAAATGGTTGGTGGAAGGAGAAATGTCAACACAAATCAACAAACTTTTCGAGTTCTATATCCATCATGGATCCATAATTTGATTGAAGGAGGAGATGTAAGTATGTACATAGAAGATGAATTTGAGATCAGAACTGCTAAGAAACTAGCAATTGTGGGACTCTCTTGCATTCAATGGTATCCTATAAGTGGTCCATCCATGAAAACAGTAATACATATGTTGGAAGGAGAAGTAGATGAATTAAAAGTGCCTCCCACCTTGTTTGATTTTACTACATCAACCACTACAAGTATCATTGTTCCTGCAAGACATTTGAATTCAGATTTAGATGTGATTCATGAATTAGAATAA 1023 0.3666 MIKQDSKSFWRIMMHSSPRFSYADIKRITNHFKNKLGEGAHGTVFKGKLSTDIQVAVKVLNNSEMTVRASCMKWEPWAKFITSTLFVCWAFVLTVFIVLLFEFFSNGSLQKFISSPDDKENFLGWSKLQEKALSIAKGIEYLHQGCDYRILHFDINPRNVLLDQNLSPKISHLGLAKLCPKNQNTVSMTAARGTLGYIALEVFSRNFENVSYKPDIYSYRILLLEMVGGRRNVNTNQQTFRVLYPSWIHNLIEGGDVSMYIEDEFEIRTAKKLAIVGLSCIQWYPISGPSMKTVIHMLEGEVDELKVPPTLFDFTTSTTTSIIVPARHLNSDLDVIHELE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral248g00006 340 Gene3D Transferase(Phosphotransferase) domain 1 104 307 - -
Pral248g00006 340 Gene3D Phosphorylase Kinase; domain 1 2 78 - -
Pral248g00006 340 Pfam Protein tyrosine and serine/threonine kinase 31 232 IPR001245 GO:0004672|GO:0006468
Pral248g00006 340 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 311 IPR045874 GO:0004672
Pral248g00006 340 SUPERFAMILY Protein kinase-like (PK-like) 9 298 IPR011009 -
Pral248g00006 340 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Pral248g00006 340 ProSiteProfiles Protein kinase domain profile. 30 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral248g00006 Pral-Chr248 78577 81277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral248g00006 20 309 Receptor kinase-like Gene Family AT1G66910 41.722 2.81e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral248g00006 PK_Tyr_Ser-Thr 2.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral248g00006 - - ahf:112805998 383.259