Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral248g00004 ATGTTCGATTGTTGTGCTCCTATAACTGCAGTTCCGGTTGTGCAAGCTTTGCTGTTGATTGTGTTCGTTGGCATATGCATCTACGTCAAGAAGAAAAGAGATGATCAATCAAGACTTGGAAAGTTCTTGGCGGATTACGAGGCACTTAAACCTGCCAGATTCTCTTATGCTGATATTAAAAGAATCACAGGCCAATTCAAGCATATATTAGGTGAAGGGGCACATGGAACAGTCTTCAAAGGTAAGCTATCTTCTGAAGTTCAAGTGGCTGTCAAAGTACTCAATAATAACGATCGAAAAGACTTCATTAATGAAGTGGGGACAATGGGCAAAATTCATCACATAAATGGTGTTCGTTTGTTGGGCTTTTGTGCTGAGGGTCTTCATTGTGCTCTTGTTTATGACTTTTTTCTTAATGGTTCCCTCTAA 429 0.3986 MFDCCAPITAVPVVQALLLIVFVGICIYVKKKRDDQSRLGKFLADYEALKPARFSYADIKRITGQFKHILGEGAHGTVFKGKLSSEVQVAVKVLNNNDRKDFINEVGTMGKIHHINGVRLLGFCAEGLHCALVYDFFLNGSL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral248g00004 142 PANTHER OS07G0415500 PROTEIN 13 142 - -
Pral248g00004 142 Pfam Protein tyrosine and serine/threonine kinase 66 142 IPR001245 GO:0004672|GO:0006468
Pral248g00004 142 ProSiteProfiles Protein kinase domain profile. 64 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral248g00004 142 FunFam serine/threonine-protein kinase PBS1-like 29 136 - -
Pral248g00004 142 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Pral248g00004 142 SUPERFAMILY Protein kinase-like (PK-like) 47 142 IPR011009 -
Pral248g00004 142 Gene3D Phosphorylase Kinase; domain 1 42 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral248g00004 Pral-Chr248 62629 63057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral248g00004 31 142 Receptor kinase-like Gene Family AT1G66980 46.087 1.95e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral248g00004 PK_Tyr_Ser-Thr 7.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral248g00004 - - tpra:123893290 178.333