Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral248g00002 ATGGACAGAGAGAAAGGCCTAAGGTGCTGGTATCCAGTGTTGTTTACGCAGCTTCTAATGTATGGACTTACGAGTTCTCAAGAGCAGAGCAAGTCCTGTGCTCCGTCTCGTTGCGGCATTATCACAAACATCTCACATCCATTTCGACTACGAGATGACCCGCCCAACTGCGGCGATCCGACTTACGAGCTAGCCTGTGAAAACAACATCACTCTCCTCCATTTGTATTCAGCAACATACAGAGTGGCGGGAATCAACTACAACAACCACACAATCCGACTCGTAGATCCTGGCGTTGAGGAGGGCAATTGCTCCTCCCTCCCTCGCTATCTCTTATCCCGATCTAATTTCACCGACACTTACAACTTATCCTATGATTATGATAGCCGTAATCCCTATAACGCCGCTCTGATGGACGACGAAACTATATTCGAGCATGTGGTGTACCTGAAGTGCAGGGATCCAGTAAGGGACGACGCAGCGTACCTGGACACAGCACCCTGCGTGAATTGGGAAGGAGGAGGCCATGCTTATGCTGTAGCTGGAGACTTGACGGCTTACCAGTTGAATTCTGGGTGTCGCGTAAAATGGGTGGCCGCGATAGCCTCACATCGGGAGTCATTGGGAAATGGAGGAATAAAGTCCTACGCTGATATTCACACACTGCTTTCCTTCGGATTTGAGCTTTCGTGGTGGGTACGAGCCTGTGTTGATTTTAAATGCCCGAGTTATTATGCATGCTCTTTGGAGCCTGGAACTCTCAGTCTCGGATGCGGTGAATTTTCGAAACTGCAAATATTGGCCGAAGATTATCTTTATGGACTTGAAAAGGGATTGTTCCAAATAGCAGGGAAGGGTATATACGATCACCACGATGACACCGATTTTATTCTGACAAATGCTGCAATCAAACTGGGAATAATTACAGGAAGAGTTGTTGTGCCATACACCATAGTAAGATTTTCAATTGGTGTCATATTTCTATCTATACTGTTGGTTTACATATACCGTAGAAGGCACATGTCAATATTCGAAAACATCGAAGACTTTATACGACTTCACAACCTCATTCCAATAAGATACTCCTACAAGGATTTGAAGGCAATGACCAAAGGTTTCAAAGATAAGTTAGGTGAAGGAGGATTCGGCACTGTCTACAAAGGGAAATCAAAGAGTGGACATGATGTTGCTGTCAAAATGTTGGGTAAATCCAAAGCTAATGGCCAAGAATTTATTAGTGAAGTGGCAACTATTGGGAGGATTCATCATGTTAATGTGGTGCATCTTATTGGATTCTGTGTGGACAGCTCAAAGCGAGCTCTTGTCTACGAATTCATGTCTAATGGATCATTAGATAAATATATTTTTTCTAAACAAGAAGGTAACCCTTTAAGTTATCACAAGATGTATGACATATCTCTAGGAGTAGCTCATGGGATTGCTTACCTTCATCATGGATGTGACATGCAAATATTGCATTTTGATATCAAACCCCATAACATTCTTCTCGATGATGACTTTACTCCAAAGATTTCAGATTTTGGACTTGCAAGGTTATATTCCGTTGACGATAGCATTGTAACTTTAACTGCAGCAAGAGGAACAATAGGGTATATGGCTCCTGAATTATTCTACAAGAATATTGGAGGAGTATCTTATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAAATGGCTAGTCGAAGAAAGAATTTGAATCCACATGTTGAACATTCAAGCCAACTTTACTTTCCATTGTGGATTTATGACCAATTTGATGAAGAAAAAGATATAGAAATAGAAGATTTGACAAAAGATGAAAAAGATTTAGCAAAGAAAATGTTCATAGTGGCACTATGGTGTATACAACTAAAACCTACAGATCGCCCTTCAATGAGTAAAGTAATAGAGATGCTAGAAGCAGATGATGTTCAAAGTCTTGAAATGCCTCCAAAGCCTTCTTTATATCCTAATGAAGAAGTTTTGGTGGATGATGGATCCTCCTCTAGCCAGGCAACATCAACTATCTCTATACATTCTCAAAGCAATCGTCAAGGTGAGGGTACAAGTGATGGGAAATGA 2088 0.4148 MDREKGLRCWYPVLFTQLLMYGLTSSQEQSKSCAPSRCGIITNISHPFRLRDDPPNCGDPTYELACENNITLLHLYSATYRVAGINYNNHTIRLVDPGVEEGNCSSLPRYLLSRSNFTDTYNLSYDYDSRNPYNAALMDDETIFEHVVYLKCRDPVRDDAAYLDTAPCVNWEGGGHAYAVAGDLTAYQLNSGCRVKWVAAIASHRESLGNGGIKSYADIHTLLSFGFELSWWVRACVDFKCPSYYACSLEPGTLSLGCGEFSKLQILAEDYLYGLEKGLFQIAGKGIYDHHDDTDFILTNAAIKLGIITGRVVVPYTIVRFSIGVIFLSILLVYIYRRRHMSIFENIEDFIRLHNLIPIRYSYKDLKAMTKGFKDKLGEGGFGTVYKGKSKSGHDVAVKMLGKSKANGQEFISEVATIGRIHHVNVVHLIGFCVDSSKRALVYEFMSNGSLDKYIFSKQEGNPLSYHKMYDISLGVAHGIAYLHHGCDMQILHFDIKPHNILLDDDFTPKISDFGLARLYSVDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRKNLNPHVEHSSQLYFPLWIYDQFDEEKDIEIEDLTKDEKDLAKKMFIVALWCIQLKPTDRPSMSKVIEMLEADDVQSLEMPPKPSLYPNEEVLVDDGSSSSQATSTISIHSQSNRQGEGTSDGK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral248g00002 695 Gene3D Transferase(Phosphotransferase) domain 1 446 651 - -
Pral248g00002 695 FunFam PR5-like receptor kinase 446 653 - -
Pral248g00002 695 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Pral248g00002 695 Pfam Protein kinase domain 374 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral248g00002 695 CDD STKc_IRAK 377 642 - -
Pral248g00002 695 MobiDBLite consensus disorder prediction 649 695 - -
Pral248g00002 695 FunFam serine/threonine-protein kinase PBS1-like 343 445 - -
Pral248g00002 695 MobiDBLite consensus disorder prediction 665 695 - -
Pral248g00002 695 ProSiteProfiles Protein kinase domain profile. 371 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral248g00002 695 Gene3D Phosphorylase Kinase; domain 1 339 445 - -
Pral248g00002 695 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Pral248g00002 695 PANTHER RUST RESISTANCE KINASE LR10-RELATED 342 669 IPR045874 GO:0004672
Pral248g00002 695 SUPERFAMILY Protein kinase-like (PK-like) 356 642 IPR011009 -
Pral248g00002 695 SMART serkin_6 371 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral248g00002 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral248g00002 Pral-Chr248 34960 42856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral248g00002 318 687 Receptor kinase-like Gene Family AT4G18250 46.174 2.95e-107 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral248g00002 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral248g00002 - - pcin:129321062 867.455