Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral248g00001 ATGGCCTTCTCCTTTTTCTCTGGACTGCAAATTCACGCAGGGAGACGTATCCACGTACGCTGCGTCGTCCCTCACTGGATCGCTGCACTTCAGGTAGCGGTGCTCCTTCTGAAACAAGGGCATGGTCAGCAACAGCATGCGCCTAATGATAAAATTGTCCCCTTCCATCTCTATGACAGTGGCAATATGGTTGAGTTCCCTTCTATCCCTGCTCTCGAAGGAGTAAGCCTCCGTGTCGATGTCATAATCGATGAATTGCGCATCTTATCCACACAGGATCCAGGAGGTTGTCTTCCCAGACTCTTTCTACAACGTCATCTCTACAATTCATCCATTTATCCTTTAGAGTTTGATGATATGCCCGACAAAAATGTTACTTTCTTCAATTGTTCTTCGCTTGGATCACGATACCTCAGAAACGAAGACTTTTCTACTCCATTTGCACAAGATATGCTCGTCTGCCCGATTTATGCTGTTCAGTCCTATGATAGTATCCTGAAGCAGGACCTAGCTTTCTGCACCAAGATGTTTCAACTAGTTTCACCCATTTCTGCATTTTCACTTCAGGAAAACATGTTACAATTTAGATGGCCACAACCAAAATCCGACGTTGAAAAGCACAAAACCAACGCGATTCCTGGAATTGTTTTAGCAGGGTCAATTGTGCTGCTGGTGGTGTTCATTGCGTGCTTTTACATATACCGCTACTTCAAAGAGAAAGGAGACGATCAAGTGAGATTGGAAAAGTTTTTGGAGGATTATGAGGTGCACAAACCTACTAGATTTTCTTACGCTGATCTGAAAAGAATCACAAATCATTTCAAGGATAAATTAGGTGAAGGAGCTCATGGAGAAGTTTTTAAAGGCAAGCTATCAACCGAAATCCAGGTAGCTGTAAAAGTACTCAATAATTCAGGGTGCGATGGCCAAGACTTCATCAATGAGGTGGGGACTATGGGCAGAATTCATCACATAAATATTGTTCGTTTGCTTGGCTTCTGTGCTGATGGTTCTCGTCGTGCTCTTGTTTATGATTTCTTTCCTAATGGTTCACTCCAAAAGTTCATATCTTCACCAGACAACAAAGAAAATTTCCTTGGATGGTTGAAGTTGCAACAATTAGCTCTTGCCATAGCCAAAGGGATTGAATATCTTCATCAAGGCTGTGATTACCGAATTCTCCACTTTGACATTAATCCTCGTAATGTGTTGTTAGATGACAATTTTATTCCGAAAATTTCTGATTTTGGTCTAGCCAAGTTGTGTTCTAAAAATCAAAGTACAGTGTCAATGACAGCAGCTAGAGGAACTTTAGGCTACATTGCACCTGAAGTCTTCTCTCGAAATTTTGGAAATGTGTCATATAAAGCAGATATTTACGGTTATGGAATGCTACTTCTAGAAATGGTTGGTGGGAGGAAAAATGTTGACACAAATCCAGGAACCTTTCAAGTGTTATATCCAGAATGGATCCATAGTTTGATTGAAGGAGGTGACATAAGTATCTACATCGAAGATGAAGGTGATGTTAAAATTGCAAGGAAACTAGCAATTGTGGGGCTTTGGTGCATTCAGTGGCATCCAATAGATCGTCCATCGATGAAAACTGTAATACAAATGTTGGAAGGAGAGGTTGATAAATTAAGGGTGCCTCCTTCTCCATTTGACTTTGCTACTTCAACTAATACGAGTGTCGTTATTCCTACGAGACGTTTGAATTTAGAGTTAGAAGTGATTCATGAATTCGAATAA 1752 0.4087 MAFSFFSGLQIHAGRRIHVRCVVPHWIAALQVAVLLLKQGHGQQQHAPNDKIVPFHLYDSGNMVEFPSIPALEGVSLRVDVIIDELRILSTQDPGGCLPRLFLQRHLYNSSIYPLEFDDMPDKNVTFFNCSSLGSRYLRNEDFSTPFAQDMLVCPIYAVQSYDSILKQDLAFCTKMFQLVSPISAFSLQENMLQFRWPQPKSDVEKHKTNAIPGIVLAGSIVLLVVFIACFYIYRYFKEKGDDQVRLEKFLEDYEVHKPTRFSYADLKRITNHFKDKLGEGAHGEVFKGKLSTEIQVAVKVLNNSGCDGQDFINEVGTMGRIHHINIVRLLGFCADGSRRALVYDFFPNGSLQKFISSPDNKENFLGWLKLQQLALAIAKGIEYLHQGCDYRILHFDINPRNVLLDDNFIPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKADIYGYGMLLLEMVGGRKNVDTNPGTFQVLYPEWIHSLIEGGDISIYIEDEGDVKIARKLAIVGLWCIQWHPIDRPSMKTVIQMLEGEVDKLRVPPSPFDFATSTNTSVVIPTRRLNLELEVIHEFE 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral248g00001 583 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Pral248g00001 583 SUPERFAMILY Protein kinase-like (PK-like) 254 542 IPR011009 -
Pral248g00001 583 PANTHER RUST RESISTANCE KINASE LR10-RELATED 246 559 IPR045874 GO:0004672
Pral248g00001 583 FunFam PR5-like receptor kinase 347 552 - -
Pral248g00001 583 FunFam serine/threonine-protein kinase PBS1-like 241 346 - -
Pral248g00001 583 Gene3D Phosphorylase Kinase; domain 1 246 346 - -
Pral248g00001 583 ProSiteProfiles Protein kinase domain profile. 272 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral248g00001 583 Gene3D Transferase(Phosphotransferase) domain 1 347 550 - -
Pral248g00001 583 Pfam Protein tyrosine and serine/threonine kinase 274 540 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral248g00001 Pral-Chr248 19465 45265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral248g00001 208 554 Receptor kinase-like Gene Family AT1G66910 46.537 7.80e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral248g00001 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral248g00001 - - tpra:123893290 647.506