Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2472g00001 ATGGAGATGTCATGGCAGAGCTGGCTCTCCGATGATCTGAACAACAATGTGGTCACCGTCACCACCACAGACGGTGGCGATGCCGCCATTACAACCCCTACCGTTGACGATTCCGGCAGCCAGCCAAAGCTTAACAGCTCCAGCTCAGTCCTCTCAGAACTCGCCGCCAGTTTATCTGACAAACCTGCTGCTCCGACCGCAGTATGGTCTCCATCGGCTTACATTCTGTCTTTCAATAACTCAACGGTATTACCGGCCTCCATGGATGAATGTGCAGTGAAGAGTTCTAATAACGAGCATCAATCAGAGAGTGGCACTGCACGAGGAGGCACAAAACGAACCCTAGAAGACGGCCCTAATAATGACACAAGGGCAAAACAAGGGACAAAGAAAACTAGAAGTTCATCTGAGACATTGGATCATATAATGGCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTCATTGCACTCTCAGCTACAATCCCTGGTCTGAAGAAGATAGACAAGTCTTCTATACTTAGCGAAGCTATCAATCACGTGAAGAGTTTTCAAGAACGAGTTAGGGAGTTAGAGGAACAGAACAAGAAGATAAGTGCAGAATCATCAGTAGTGTTGTGTAGAAAGAAATCGAACCAGGTGCTCAACCCAGATGATGAAATGAGCTGTGATTATGATAATAATTGCTTCAGAAGTAGTAGTAATAATGAAGCACTGCCTCAAGTGGAAGCAAGATTTTTAAACAAAGAGATTCTCATCAGAATCCACTCTGAGAAACAAAATGGCATCATGCTTAACATTTTGTCTTTTCTTAGAAATCTTCATTTCTCCATAATCAGTAGCAGTGCCTTACCATTTGGGCCCTCCACTCTTGATATTACCATTATTGCTGAGGTTGGTGACCAATGCAAAATATCAGTGATGGAAGTTGTGAACAAGATGAGAATGGCTCTGTTGAAGTCATCTGAGAACAAGAAGTGA 984 0.436 MEMSWQSWLSDDLNNNVVTVTTTDGGDAAITTPTVDDSGSQPKLNSSSSVLSELAASLSDKPAAPTAVWSPSAYILSFNNSTVLPASMDECAVKSSNNEHQSESGTARGGTKRTLEDGPNNDTRAKQGTKKTRSSSETLDHIMAERKRRQELTEKFIALSATIPGLKKIDKSSILSEAINHVKSFQERVRELEEQNKKISAESSVVLCRKKSNQVLNPDDEMSCDYDNNCFRSSSNNEALPQVEARFLNKEILIRIHSEKQNGIMLNILSFLRNLHFSIISSSALPFGPSTLDITIIAEVGDQCKISVMEVVNKMRMALLKSSENKK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2472g00001 327 MobiDBLite consensus disorder prediction 93 109 - -
Pral2472g00001 327 Coils Coil 175 202 - -
Pral2472g00001 327 Pfam Helix-loop-helix DNA-binding domain 141 186 IPR011598 GO:0046983
Pral2472g00001 327 SMART finulus 142 191 IPR011598 GO:0046983
Pral2472g00001 327 MobiDBLite consensus disorder prediction 93 139 - -
Pral2472g00001 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 203 IPR036638 GO:0046983
Pral2472g00001 327 MobiDBLite consensus disorder prediction 115 139 - -
Pral2472g00001 327 MobiDBLite consensus disorder prediction 23 46 - -
Pral2472g00001 327 PANTHER BHLH TRANSCRIPTION FACTOR 35 322 - -
Pral2472g00001 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Pral2472g00001 327 Gene3D - 135 206 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2472g00001 Pral-Chr2472 15018 16583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2472g00001 122 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.928 1.90e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2472g00001 HLH 6.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2472g00001 - - pcin:129289587 285.034