Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2470g00002 ATGACAATTATTGGTGATAATGACCGGCGTTTGGGATGGAGATCGCCGGCCGTTAGGCCTTATGTACGGTCCAAAACGCCTCGGCTTCGGTGGACATCTGATCTTCACCGTTGCTTCTTGCTTGCAGTTCAGAGGCTTGGGGGAGAAGAGAGGGCAACACCTAAGTTGGTCTTACAGCTCATGAATGTTAAGGGCCTTACCATTTCTCATGTCAAAAGCCATCTTCAGATGTACAGGAGCATGAAGCATGAGCAGACGCTTCAAGCTTCTCCATATTGTCGGAGTTGCAGGAATAATATTAAGGAGGAAGAACATAATGATGACAAAGATGGAAGAAGGGAGGAGGATACATCAGAAGCAATTCATGGTGTCAGAGAGCAGACCCGTTCCTATATCATCTTCAACGACCTTTTCAAAAGCCCCGCGGATACTGAGGAGAGGAAGGAGATGAAAGCAGAAAGTGGAGCTGGTGGTAATGATCAAAGATTGGAAGGGGAAGATTTGCAGGAGATAGGAGAGAGAGTGGGTGTCGAAGACGACAAGAAGCTGTCTCTGTCAATGAGCTCAAAAGGTTTTCGGGCATGGCTGATGAAGCAATCCAACCCCCTGGTCTTCCCCTAA 621 0.4767 MTIIGDNDRRLGWRSPAVRPYVRSKTPRLRWTSDLHRCFLLAVQRLGGEERATPKLVLQLMNVKGLTISHVKSHLQMYRSMKHEQTLQASPYCRSCRNNIKEEEHNDDKDGRREEDTSEAIHGVREQTRSYIIFNDLFKSPADTEERKEMKAESGAGGNDQRLEGEDLQEIGERVGVEDDKKLSLSMSSKGFRAWLMKQSNPLVFP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2470g00002 206 Gene3D - 26 84 - -
Pral2470g00002 206 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 139 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral2470g00002 206 FunFam Myb family transcription factor 25 83 - -
Pral2470g00002 206 MobiDBLite consensus disorder prediction 103 122 - -
Pral2470g00002 206 NCBIfam myb-like DNA-binding domain, SHAQKYF class 27 81 IPR006447 GO:0003677
Pral2470g00002 206 Pfam Myb-like DNA-binding domain 29 79 IPR001005 -
Pral2470g00002 206 MobiDBLite consensus disorder prediction 143 175 - -
Pral2470g00002 206 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2470g00002 Pral-Chr2470 9748 11797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2470g00002 18 86 G2-like Transcription Factor Family AT2G42660 71.014 1.06e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral2470g00002 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2470g00002 - - pcin:129292658 224.172