Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral246g00006 ATGGTGACTAGTTTTGCAATAATGATCATCAGATTTTGTATTCAACTATTCAGCATCCTCTTCAACTGCTTCAAGCTAGCTTATCACCATTTCAAATGGTTCTTGGAATTTCTTACCTACAGCCCATTTTACAGCCTCCATGTTCATCATCACCATCTGCCTCCTGAAGAGTCGTTTCAGATTGTTGCAGAAGAACGGGTCGAGATATGGCGTCCTCGTGAAGGAGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAGCAAGATTGGTGAAGGAGATGAAGTTAGGGTTCTGAGATGTGAACATGTTTTCCACAGAAATTGTTTGAATCAGTGGGTTGGATTCAGGAACTTCACTTGTCCTCTTTGTAGGGACTTTCTGGGTTCTGGGATTAGAAATGTTGTTCATGGTGATGGAGGAGGAACACATGTGATTTTCTTTAGGTTTTCTTCGTTCTTTGAGGATAATTCTGAGCGTGAGAACTGGTGGCTTCGTCATGAAAAGGAAGAATTTCTTTTGCCCGAGTGCTTTGGTCACAGCATGGATCAGCTGGCACGTAGTCCTCCTTAG 567 0.4286 MVTSFAIMIIRFCIQLFSILFNCFKLAYHHFKWFLEFLTYSPFYSLHVHHHHLPPEESFQIVAEERVEIWRPREGEEEVDCAVCLSKIGEGDEVRVLRCEHVFHRNCLNQWVGFRNFTCPLCRDFLGSGIRNVVHGDGGGTHVIFFRFSSFFEDNSERENWWLRHEKEEFLLPECFGHSMDQLARSPP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral246g00006 188 SMART ring_2 81 122 IPR001841 -
Pral246g00006 188 Pfam Ring finger domain 80 123 IPR001841 -
Pral246g00006 188 CDD RING-H2 81 123 - -
Pral246g00006 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 126 IPR013083 -
Pral246g00006 188 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Pral246g00006 188 PANTHER RING ZINC FINGER PROTEIN-RELATED 60 126 - -
Pral246g00006 188 SUPERFAMILY RING/U-box 69 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral246g00006 Pral-Chr246 76538 77697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral246g00006 19 128 C3H Transcription Factor Family AT1G15100 37.069 3.98e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral246g00006 K16282 - pcin:129296604 189.119