Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2468g00007 ATGTATTTATCGGAGAAACCCCGACCCATCGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAGTGCGGAGCTCCCTCCTCCTCCGCCGCCACTTCAACAACCTCAGCAACATCAAATGATCCTCGGCGACAGTAGTGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTGCAAGACGAAACGAGAAACCTCATTGCTTTTCGCCGCGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCGGGGAAGATGAGAGATAAGGGATTTGATCGATCACCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAGTTTAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGTTCCGCTAAGATGTCGTATTACAAAGACATTGAAGAGATTTTGAAAGAGAGGAGCAAGAGTGTGTGCTACAAGAACCCTACTCCTTCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGATACCAACATTTCTTTTGGGCCTGTTGAAGCCACTGGCAGATCAACACTCAATCTTGAGAATCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGTTGGCACAAGTGGGGTTCCTCCTTGGAGTTGGCGAGAAACTCCTATAAGCACAGATGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTTAAATGGGGCGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAATAAGGAGTCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGATCAAATTCATGTTCATACTGAAGAGAAGATCTTTTACACCGAAGAAGATCACCGTGACTTTCTGGCTCGGCGAGGCTGGACATCTCTAAGGGAACTTGATGGATATAGAAACATTGATAACTTCGATGATCTTCAACCTGGTGCCATGTATCGTGGTGTGAGTTGA 1143 0.4471 MYLSEKPRPIDFYKEEATPDMMIEVASSAELPPPPPPLQQPQQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRNLIAFRREMDGLFNTSKSNKHLWEQISGKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCYKNPTPSKVESYMQFSDKGMEDTNISFGPVEATGRSTLNLENRLDHDEHPLAITAADTVGTSGVPPWSWRETPISTDGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTSLRELDGYRNIDNFDDLQPGAMYRGVS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2468g00007 380 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Pral2468g00007 380 Pfam Myb/SANT-like DNA-binding domain 69 153 IPR044822 -
Pral2468g00007 380 SMART sant 66 128 IPR001005 -
Pral2468g00007 380 CDD GT1 68 133 - -
Pral2468g00007 380 PANTHER FI21293P1 44 354 - -
Pral2468g00007 380 MobiDBLite consensus disorder prediction 21 46 - -
Pral2468g00007 380 FunFam trihelix transcription factor GT-1 70 132 - -
Pral2468g00007 380 Gene3D - 70 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2468g00007 Pral-Chr2468 40180 44675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2468g00007 20 379 Trihelix Transcription Factor Family AT3G25990 67.925 1.76e-175 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral2468g00007 Myb_DNA-bind_4 2.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2468g00007 - - pcin:129298584 640.188