Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2468g00006 ATGTATTTATCGGAGAAACCCCGACCCATCGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAGTGCGGAGCTCCCTCCTCCTCCGCCGCCACTTCAACAACCTCAGCAACATCAAATGATCCTCGGCGACAGTAGTGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTGCAAGACGAAACGAGAAACCTCATTGCTTTTCGCCGCGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCGGGGAAGATGAGAGATAAGGGATTTGATCGATCACCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAGTTTAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGTTCCGCTAAGATGTCGTATTACAAAGACATTGAAGAGATTTTGAAAGAGAGGAGCAAGAGTGTGTGCTACAAGAACCCTACTCCTTCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGATACCAACATTTCTTTTGGGCCTGTTGAAGCCACTGGCAGATCAACACTCAATCTTGAGAATCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGTTGGCACAAGTGGGGTTCCTCCTTGGAGTTGGCGAGAAACTCCTATAAGCAATGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTTAAATGGGGCGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAATAAGGAGTCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGATCAAATTCATGTTCATACTGAAGAGAAGATCTTTTACACCGAAGAAGATCACCGTGACTTTCTGGCTCGGCGAGGCTGGACATCTCTAAGGGAACTTGATGGATATAGAAACATTGATAACTTCGATGATCTTCAACCTGGTGCCATGTATCGTGGTGTGAGTTGA 1140 0.4465 MYLSEKPRPIDFYKEEATPDMMIEVASSAELPPPPPPLQQPQQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRNLIAFRREMDGLFNTSKSNKHLWEQISGKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCYKNPTPSKVESYMQFSDKGMEDTNISFGPVEATGRSTLNLENRLDHDEHPLAITAADTVGTSGVPPWSWRETPISNGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTSLRELDGYRNIDNFDDLQPGAMYRGVS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2468g00006 379 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Pral2468g00006 379 Pfam Myb/SANT-like DNA-binding domain 69 153 IPR044822 -
Pral2468g00006 379 SMART sant 66 128 IPR001005 -
Pral2468g00006 379 CDD GT1 68 133 - -
Pral2468g00006 379 MobiDBLite consensus disorder prediction 21 46 - -
Pral2468g00006 379 FunFam trihelix transcription factor GT-1 70 132 - -
Pral2468g00006 379 PANTHER FI21293P1 44 353 - -
Pral2468g00006 379 Gene3D - 70 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2468g00006 Pral-Chr2468 40180 44675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2468g00006 20 378 Trihelix Transcription Factor Family AT3G25990 68.108 5.41e-177 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral2468g00006 Myb_DNA-bind_4 2.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2468g00006 - - pcin:129298584 645.195