Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral245g00001 ATGGCCGAAATCCAAGTAGTCTCCACAACCTTGGTGCAAGCTCGAAGCCACCCTGGCTGCCTCATTTCAAAAATGGACTTAACTCCATGGGATCTCCAACTTCTTCAAATCGAAACCATTCAAAAAGGACTTCTCTTTCACAACCCTAAAGCCAACAAAGACACTTGTATCCAACACCTAAAAGACTCACTTTCTTCTACTCTAGACTTGCTCTTTCCCCTTGCTGGACGTTTCGCCTTCTCTGAACACGACCATAATACAATCTCTGCCTCTATTTCTTGTAACAACGAAGGTGCTTTATTTGTCCATGCCATAGCTAAGAGCATTTCTCTTTCAGATATTCTCGAACCCATTTATGTTCCTCGTTTCGTTCACTCGTTTTTTCCACTGAACGGAGTCAAAAATCATGAAGGTAATTCGAAGCCATTGTTAGCTGTGCAAGTTACGGAGCTAGTAGACGGCGTCTTCATCGGTTGTTCAATCAACCATTCTGTTGTGGACGGCAGATCGTTTTGGCATTTCTTCAATTCTTGGGCTGAAATCTCTCGAGGTTTGGACAACGTATCCAAGCTTCCTGTTCTTGAACGCTGGTTTCCGGATGGGATTGGGCGTCCCATTCGCTTTCCTTTTACTGAGGAAGATCAAAACTCTGATGGGTTGATTCTGCCGTCGCCGCCGCCAGAGAGAGTTTTTCACTTTGCAAAAGAAAAGATCGCTCATCTGAAAGCAAAAGCAAACGCGGAGGTTAACACCAACAAAATATCATCTCTACAAGCACTTCTAACTCATGTTTGGCGATCTATCATTCGAAACCAAGGTCTCGATGCGAATGAGGAAGTCAATTTTGTGTTGCTAATAGGTGCTAGACCAAGAATATTGGATCCACCATTATCGCAAAGTTATTTTGGAAATGCTGTGCATATCGGTTAAATAAAATGACCAAGAAAGCAGGGGAATTGCTTGAGGAAGGGCATGGGGATACAGCTTTCTCAAAGCCCAGAAATTGTTCATTCCCAAAGCTGTATCCCCATGTGTAAGGGTTTCTATGAGTCTTGGGTGAAAAACCCAGAGCTGTTTAGATTAAGTGGGATGAAAAGTAATACAATTGGCACAAGCAGTTCTCCGAGGTTCGACATTTACGGAAATGACTTTGGCTGGGGCAAGCCGGTGGCAGTTCGGAGTGGTTCTGCAAATAAAGCTAACGGAAAGCTTACTGTTTTTGCTGGAGCAGAAGAAGGTAGTATTGACATTGAACTTTGCTTCCGTTTTGAGATCTTAGAAGCTTTGGCAAATGACCCTAAGTTCATGGATTTTTTTGCGAAAAGTAGTGTCTTCAAGGTGGTCAGGCTAAGACCTCTAATAAGTTCAGTTTGA 1374 0.4316 MAEIQVVSTTLVQARSHPGCLISKMDLTPWDLQLLQIETIQKGLLFHNPKANKDTCIQHLKDSLSSTLDLLFPLAGRFAFSEHDHNTISASISCNNEGALFVHAIAKSISLSDILEPIYVPRFVHSFFPLNGVKNHEGNSKPLLAVQVTELVDGVFIGCSINHSVVDGRSFWHFFNSWAEISRGLDNVSKLPVLERWFPDGIGRPIRFPFTEEDQNSDGLILPSPPPERVFHFAKEKIAHLKAKANAEVNTNKISSLQALLTHVWRSIIRNQGLDANEEVNFVLLIGARPRILDPPLSQSYFGNAVHIGXIKXPRKQGNCLRKGMGIQLSQSPEIVHSQSCIPMCKGFYESWVKNPELFRLSGMKSNTIGTSSSPRFDIYGNDFGWGKPVAVRSGSANKANGKLTVFAGAEEGSIDIELCFRFEILEALANDPKFMDFFAKSSVFKVVRLRPLISSV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral245g00001 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 436 - -
Pral245g00001 457 Gene3D - 1 202 IPR023213 -
Pral245g00001 457 Pfam Transferase family 5 435 - -
Pral245g00001 457 Gene3D - 227 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral245g00001 Pral-Chr245 2086 3459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral245g00001 58 427 Monolignol Biosynthesis Gene Families AT5G48930 26.633 6.99e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral245g00001 - - qsu:111994143 487.648