Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2459g00011 ATGATTCGTGACCACTGGTTTCAAAAGAGCGTATCGAATCCTTGCAGTGTCATCGACTACAAAGTTGCTTTTCACGCGGAGTCTCCTGGTCTGTCTTTCTCTTTTTTAAACGGCATTTCCCTTTTGAAATGCGTCGAGCCTCTCGACTACAACAACCTCTTATATCCCTGTGATGGCTACTGCATTTACTATCCTCCCGAAGAAGCTAGTCACTGGCCCGAGCCTTCTAAAGGATGTTCTCTTGTCCAGCTTCCAATATTTGAAGCTAAGTTTCCCGGCTCAACCAACATATCCTTATTGGATGAAATCTATATACAAGTACATCTACCTTTCTCTTGTTTGGATGAGAAATGCGATGCCCATGAGCTCAAGAAAAACGATTCCAAGCCTATGACACCGGAGTGCAAGAAAATCGATTCCAAGTCTATAATAATAGGTGTGGCTATTGGAAGTGTTGGCATGATTATAATTGGCTTGATTGTTATTCTGTTGCGGAACAAACAAGATTACAAGTCTTTAGGCTCACAAAATCAGTCAAGAAGCATTGAATCTGATAATACTCGCTCAAGAAGCAATCAATCTGACAATACTTACTCAAATGCAATCCTAGAAAGTAGAAATATCTACTTTGGGGTACCTCTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTGGGAAGTGGAGGCTTTGGAACTGTATACCATGGAAAGCTTAAAGATGGAAGAGAAGTTGCTGTGAAGCGGCTATTTGAGCGCAACTATAAACGTGTACAGCAATTCATAAATGAAGTTAAGATCCTCACACGCTTGCGTCACAGAAACCTTGTGTCGCTGTATGGCTGCACTTCACGTGCTAGTCATGAACTGTTGCTGGTCTACGAATACATTCCAAATGGAACTCTTGGTTGTCATCTCCAGGGCAATCTCGCAAAACCTGGCTCACTGCCATGGCATGTGAGGATGAGGATTGCCATAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGTGACATCATTCACCGTGATGTCAAATCCAGCAACCTTCTACTTGATTACCATTTTTGTGTCAAGGTAGCTGACTTTGGTCTTTCAAGGTTGTTCCCCAAGTTTGTCTCTCATGTCTCCACAGCTCCAGCAGGAAGCCCAGGTTATTTGGACCCAGAATATCACCAATGCTATCAGCTTACTGAAAAGAGTGATGTTTATAGCTTCGGGGTCGTACTCATTGAGCTGATATCTTCTAAGCCAGCTATTGATGTTACAAGGAACAAGGATGAGATTAAATTGGCAAACATGGCAGTTAACAAGATTCAAAGAAGAGCGTTCACTGAGCTGGTAGATCCTTCCCTTGGTTTTGAGTCAGACAAGGAGGTTAAGAAGATGATAATCTCAGTGGCAGAGTTAGCTTTTCAGTGCCTACAGAGGGATAGGGAGCTAAGACCTTCCATGGATGAAGTAATGCAGATTCTGCAGAAAATAGAAAACGGGAAGCATGATCTTAAGCATCTAGAGTTTCATGGTACTGAGTTTTCAAACAAGGGAATTCATACATCTCTCCCAACCTCAATGCACAGGGTTGGAACAGGATCATTGACGAACTCAAAGCCACAAGGCCCTCCCCATACAATATGA 1659 0.4256 MIRDHWFQKSVSNPCSVIDYKVAFHAESPGLSFSFLNGISLLKCVEPLDYNNLLYPCDGYCIYYPPEEASHWPEPSKGCSLVQLPIFEAKFPGSTNISLLDEIYIQVHLPFSCLDEKCDAHELKKNDSKPMTPECKKIDSKSIIIGVAIGSVGMIIIGLIVILLRNKQDYKSLGSQNQSRSIESDNTRSRSNQSDNTYSNAILESRNIYFGVPLFSYEELEEATNKFDQSRELGSGGFGTVYHGKLKDGREVAVKRLFERNYKRVQQFINEVKILTRLRHRNLVSLYGCTSRASHELLLVYEYIPNGTLGCHLQGNLAKPGSLPWHVRMRIAIETANALSYLHACDIIHRDVKSSNLLLDYHFCVKVADFGLSRLFPKFVSHVSTAPAGSPGYLDPEYHQCYQLTEKSDVYSFGVVLIELISSKPAIDVTRNKDEIKLANMAVNKIQRRAFTELVDPSLGFESDKEVKKMIISVAELAFQCLQRDRELRPSMDEVMQILQKIENGKHDLKHLEFHGTEFSNKGIHTSLPTSMHRVGTGSLTNSKPQGPPHTI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2459g00011 552 SMART serkin_6 227 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00011 552 FunFam receptor-like serine/threonine-protein kinase NCRK 203 303 - -
Pral2459g00011 552 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Pral2459g00011 552 MobiDBLite consensus disorder prediction 523 552 - -
Pral2459g00011 552 Gene3D Transferase(Phosphotransferase) domain 1 304 513 - -
Pral2459g00011 552 MobiDBLite consensus disorder prediction 174 196 - -
Pral2459g00011 552 Gene3D Phosphorylase Kinase; domain 1 202 303 - -
Pral2459g00011 552 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 109 510 IPR044652 GO:0004672
Pral2459g00011 552 SUPERFAMILY Protein kinase-like (PK-like) 208 502 IPR011009 -
Pral2459g00011 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Pral2459g00011 552 Pfam Protein kinase domain 228 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00011 552 FunFam Wall-associated receptor kinase-like 20 304 511 - -
Pral2459g00011 552 ProSiteProfiles Protein kinase domain profile. 227 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00011 552 CDD STKc_IRAK 233 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2459g00011 Pral-Chr2459 62430 65384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2459g00011 78 504 Receptor kinase-like Gene Family AT1G25390 50.463 2.24e-142 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral2459g00011 Pkinase 8.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2459g00011 - - pcin:129310591 724.546