Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2459g00004 ATGATTTCAGTTCAAGTTTTTTGCTCTCTCTTAGTTTCATTCCTCTTGCACCTGGTCTGGGTTGGATATGCAAAGTGCCCACCTTCATTTTACTGTGGAGATCTGGGCAACCAAATTCAGTTTCCTTTCACCACATCAGATCACCCAGATTGTGGCTTATTGGCCATTCATGGCTGTTATGAAGGAGACCCAGGTGCCAAAAAAACCATTAAGTACAGTGGAAAATGGTTTGATGTAACAGAACTCGACCTGTCTACCATTACCATCAGAGACGATCATCTCCACGACCTCTTGCTGGTAAAAAGCTGTAGTGTCTTCACCTATGATCTTTCTTTCATCACAAACTCTTCTTTTGCTTCTTATCATTTAAAAAATAATTTCACCATGTTCGTCTGCAACAACCGCCTCAATCTGAATCCTGCGGAATCGTCATTGTACTATAACCATCGTTTTGATAACTGCTCTCAAGAAATCTTCTACAGAAAGTCACTTTCTTATCGTGAGGGCTCTGATGATTATTTGGTCTCCAGATTTTTGAACTCGTGCACGCCTGTTGATCTTCCAATCGCGAAGGACGCTGAGGTTGTCGATAATCCTTTTGCCTTCCTGTCGGAAAATATCACCATCGGTATACAGCCATCTCCTGCTTGTGATAGTTGTCACAACTTTTATGGAGGAAAATGTCAAGCTGACTCCAAGGGCAGGTTTTATTGTGCTAAAGAGAAATCAAGAAAGGTCAGAGTTATTGTGGCAGCAGCAGTTTCAGCCACTGGGGTAGTGGGACTACTTCTGCTTTTGGGATTCTACTTGAGAAGACGCTTTTACAGCAGGCAAGACCAGACCCACATAATAATTGAGCAGTTTCTTGAAGAACATGGACACCTTGCAGCCAAAAGGTATAGTTATTTGGAGATCAAGAAAGCCACAAACTCCTTCAAAAACAAGTTGGGTCAAGGAGGATTTGGCAGTGTGTACAAGGGCAGGTTAAGTGATGGAACTCTTGTGGCAGTGAAGGTTCTGACTGAACTGAACGGTGATGGAGAAGAATTCATCAATGAAGTTTCCAGCATTAGTGTGACTTCTCATGTCAACATTGTTAGCTTATTGGGTTTTTCCTTGGAGGGTTCAAAAAGAGCTTTGATATATGAGTACATGTCCAGTGGATCAATTGACAAATACATACAAAACCAGGCAGATCCATCAAAGATCAATCTCCAACTGACCTGCAAAGCTATATACAATATTGCAATCGGTGTTGCTCGAGGATTAGAGTACCTGCACAGAGGCTGCAACACTAGAATCTTGCATTTAGACATAAAGCCTCACAACATTTTGCTCGACGATGATTTCTGTCCTAAGATATCAGATTTTGGACTGGCAAAAATCTGTCCGAAGAAAGATAGCATTGTGTCATTGTTAGGCGCGAGAGGAACTGCAGGATATATAGCACCAGAAGTGTTTTCTAGGAACTTTGGTGGGGTGTCCCACAAGTCCGATGTTTATAGTTATGGGATGATGATGTTGGAAGTAGTTGGAGGAAGGAAGAAAATGAAGATGGAAGTGGAAGAAGGTTCAGGTGAAATATTCATGCCACATTGGATTCACCAGTGCTTGAAATCAAAGCAGGAGCTGAGATTGGAGTGCATCAAGAATGAGGAAGATAGAGAGGTGATAAGTAAGATAGTGATAGTGAGCTTATGGTGCATACAGATTGAACCTTCAAATCGGCCGGCGATGAAGAAGGTGGTGGATATGATGGAAGCAGACTTGGAATCGTTGGAATTACCACCTCTGCCTGTTCTTTCTTTGCCTCCGTCATCTTCCTCTGGGACTGTTTCAGAGAGTCCTATCTCGGGCAGCTTCCATTCTATATCACTTTAG 1881 0.4242 MISVQVFCSLLVSFLLHLVWVGYAKCPPSFYCGDLGNQIQFPFTTSDHPDCGLLAIHGCYEGDPGAKKTIKYSGKWFDVTELDLSTITIRDDHLHDLLLVKSCSVFTYDLSFITNSSFASYHLKNNFTMFVCNNRLNLNPAESSLYYNHRFDNCSQEIFYRKSLSYREGSDDYLVSRFLNSCTPVDLPIAKDAEVVDNPFAFLSENITIGIQPSPACDSCHNFYGGKCQADSKGRFYCAKEKSRKVRVIVAAAVSATGVVGLLLLLGFYLRRRFYSRQDQTHIIIEQFLEEHGHLAAKRYSYLEIKKATNSFKNKLGQGGFGSVYKGRLSDGTLVAVKVLTELNGDGEEFINEVSSISVTSHVNIVSLLGFSLEGSKRALIYEYMSSGSIDKYIQNQADPSKINLQLTCKAIYNIAIGVARGLEYLHRGCNTRILHLDIKPHNILLDDDFCPKISDFGLAKICPKKDSIVSLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMMLEVVGGRKKMKMEVEEGSGEIFMPHWIHQCLKSKQELRLECIKNEEDREVISKIVIVSLWCIQIEPSNRPAMKKVVDMMEADLESLELPPLPVLSLPPSSSSGTVSESPISGSFHSISL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2459g00004 626 ProSiteProfiles Protein kinase domain profile. 310 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00004 626 PANTHER RUST RESISTANCE KINASE LR10-RELATED 282 606 IPR045874 GO:0004672
Pral2459g00004 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Pral2459g00004 626 SMART serkin_6 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00004 626 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Pral2459g00004 626 FunFam serine/threonine-protein kinase PBS1-like 279 384 - -
Pral2459g00004 626 Gene3D Transferase(Phosphotransferase) domain 1 385 594 - -
Pral2459g00004 626 Gene3D Phosphorylase Kinase; domain 1 285 384 - -
Pral2459g00004 626 FunFam PR5-like receptor kinase 385 597 - -
Pral2459g00004 626 MobiDBLite consensus disorder prediction 605 626 - -
Pral2459g00004 626 SUPERFAMILY Protein kinase-like (PK-like) 295 586 IPR011009 -
Pral2459g00004 626 Pfam Protein kinase domain 313 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2459g00004 Pral-Chr2459 23542 25704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2459g00004 14 614 Receptor kinase-like Gene Family AT1G66910 37.829 3.30e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral2459g00004 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2459g00004 - - psat:127098536 640.958