Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2459g00003 ATGGCGGTATCCTCTCGCCTCTTTCTACTTGTTTCCTTCTTCTTCTTCTTCTTAGTTTCTCATTGTCTTCTTCCCTCTGAAGGGTCCATAAACCGTGATTTAGAAGCTCTCATGGCGTTCAAAGCGGCTTCTGATACGCACAACAAGCTCACATCTTGGAACTCCAGCACCCACCCCTGTAACTGGGTCTTTGTCTCATGCCTCAAGAATCGAGTTTCGCGACTCGTTCTTGAGAATCTCGATCTCCATGGTTCCATCGAGCCGTTAACCTCTCTGACTCAGCTTCGAGTTCTGAGCCTGAAGCGAAACCGTTTTTCCGGTCCCATTCCGAGTCTGTCTAATTTTACAGCTCTGAAGCTTCTGTTTCTTTCTCACAATGAGTTCTCTGGTGCGTTTCCGGTGACGGTTACGTCGCTTCTCCGCTTGTATCGCCTTGATCTCTCTCACAACAACTTGTCCGGCGACATTCCGACTACGCTCAACAATCTGACTCACCTGCTCTCCCTCCGTCTCAATGACAACCAGTTCTCCGGTCACATTTCCATTCTAAACCTCTCCAAACTACAAGACTTCAATGTCTCCGGTAATCACCTTTCCGGCGAAATACCCAAATCAGTCTCGGGTTTCCCCGCATCATCGTTCGCTCAAAACCCATCTTTATGCGGAGCTCCATTGGTGAAATGTAAGGACGTCCATGCTGTACCGATTCAACCCGGATCTGTAGGAGCCAATATTTCATCGCCATTGATGCCGCAAAGCAGTCCTTCAACGCCGGCGAAGAATGCAGCGCCCGAAACACCATCTAATAACGCTCACCACCATCATAATGGAGCTTCGAAAATGAGACCAGTAATTCTGATAGCCATTATAGTCGGCGACGTCTTGGTTCTGGCTATAGTGTCCCTTCTTCTGTACTGTTGTTTCTGGCAAAACTACTCAGCAAAATTGAGAGAAGGAAACAGGTCGAAGCTTCTGGAAAGCGAGAAGATCTTGTATTCATCAAGCCCATACCCATCAACCCAAGCCGGATTAGAGAGGGGTCAAATGGTGTTCTTCGAAGGGATGAAGAAGTTCGAGCTAGAGGACTTGCTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGCGGGTTCGGGACGGCGTATAAAGCCGTTCTTGATGATGGTAATGTCGTGGCAGTGAAGAGGCTCAAGGACGCTCTGATTAATGGGAAGAAGGAGTTCGAACAGCACATGGAAATACTGGGAAGATTAAGACATCCCAATATTGTAAGCTTGAGAGCTTACTATTATGCTCCAGACGAGAGATTGCTGGTCTACGATTACATGACCAATGGTAGCTTGTTTTGGCTCCTTCATGGGAACCGAGGACCCGGAAGAACCCCACTTGATTGGACCACAAGGCTTAAGATAGCCGCCGGAGTGGGCCGAGGCCTGGCCTTCATCCATGGCTCATGTAAGGCCCTTAAGCTCACCCATGGTAACATCAAGTCCACCAACATCCTCATCGACCAGGACGGGGACCCACACGTGGCAGACTTTGGGCTGTCCGTTTTCGCAGCACCCGCCCCCAGATCTAACGGCTATCGTGCACCGGAAGCACTGGATGGTAGGAAAAACACGCAGAAATCCGACGTATACTCTTTCGGTGTTCTTCTCCTGGAGCTTCTCACAGGGAAGTGCCCCTCCTTAGGGGAATCGGGTGGGCCCGGAGGAGGCGGGGCCGCGGACCTACCCAGGTGGGTCCAATCGGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTCGACATAGAGCTGATGAGGTACAAGGACATTGAAGAGGAGATGGTAGGGCTGCTTCAGATCGCCATGTCTTGCTGCGCGGCTGGGCCAGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGACATACGCGGTGTTGAGATATCGCCGAGTCATGACACGTCGGACTCGGTGTCTGAGTCGCCGTCCTTGTCGAGCTAG 1986 0.5106 MAVSSRLFLLVSFFFFFLVSHCLLPSEGSINRDLEALMAFKAASDTHNKLTSWNSSTHPCNWVFVSCLKNRVSRLVLENLDLHGSIEPLTSLTQLRVLSLKRNRFSGPIPSLSNFTALKLLFLSHNEFSGAFPVTVTSLLRLYRLDLSHNNLSGDIPTTLNNLTHLLSLRLNDNQFSGHISILNLSKLQDFNVSGNHLSGEIPKSVSGFPASSFAQNPSLCGAPLVKCKDVHAVPIQPGSVGANISSPLMPQSSPSTPAKNAAPETPSNNAHHHHNGASKMRPVILIAIIVGDVLVLAIVSLLLYCCFWQNYSAKLREGNRSKLLESEKILYSSSPYPSTQAGLERGQMVFFEGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDALINGKKEFEQHMEILGRLRHPNIVSLRAYYYAPDERLLVYDYMTNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGVGRGLAFIHGSCKALKLTHGNIKSTNILIDQDGDPHVADFGLSVFAAPAPRSNGYRAPEALDGRKNTQKSDVYSFGVLLLELLTGKCPSLGESGGPGGGGAADLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMSCCAAGPDQRPRMSHVVKMIEDIRGVEISPSHDTSDSVSESPSLSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2459g00003 661 SUPERFAMILY Protein kinase-like (PK-like) 369 635 IPR011009 -
Pral2459g00003 661 MobiDBLite consensus disorder prediction 245 276 - -
Pral2459g00003 661 FunFam Nuclear pore complex protein NUP107 30 182 - -
Pral2459g00003 661 MobiDBLite consensus disorder prediction 245 274 - -
Pral2459g00003 661 SUPERFAMILY L domain-like 50 220 - -
Pral2459g00003 661 Pfam Protein kinase domain 368 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00003 661 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Pral2459g00003 661 Gene3D Ribonuclease Inhibitor 24 89 IPR032675 -
Pral2459g00003 661 CDD STKc_IRAK 371 638 - -
Pral2459g00003 661 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Pral2459g00003 661 ProSiteProfiles Protein kinase domain profile. 365 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2459g00003 661 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 441 648 - -
Pral2459g00003 661 Gene3D Ribonuclease Inhibitor 90 233 IPR032675 -
Pral2459g00003 661 Gene3D Phosphorylase Kinase; domain 1 339 440 - -
Pral2459g00003 661 Gene3D Transferase(Phosphotransferase) domain 1 441 654 - -
Pral2459g00003 661 FunFam pollen receptor-like kinase 1 337 440 - -
Pral2459g00003 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 639 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2459g00003 Pral-Chr2459 18754 22014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2459g00003 33 660 Receptor kinase-like Gene Family AT1G68400 64.953 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral2459g00003 Pkinase 8.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2459g00003 - - qsa:O6P43_032719 914.835