Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00082 ATGGAGGAGATTTTTGTGAGTCTGCCTGTAAAATCCTTGCTTCGGTTCAAATGTGTAGCCAAATCCTGGCGCGCCCTCATCGCTGACCCTTCTTTTATTGCCAGACATCTTGAACGGTCCAGATCTACCAGCAAGATTCCCCGCCTGAAGCTTATCTTCCAATTGGAAAGTTTCACTCGGGTGCCCTACATATCCTTGATTTCTAAAGACCAACCTTATTGTGTGCCCCACCACATGGAACCTCTCCCTCGGAAGGAGTATCGGGGGTTTCATGGTCACTGTGATGGGATTTTCTGTCTGTACGTGATCAGTGTCACTGAAGAAGATGAAAATGAGAATAAGTTGCTCAACTATTTGTACCCAACAAAAGGAGGAGATAATTATCTGCTGGATAAGAGCAACCTAATCCTTTGGAACCCAACAACAAAAGAGGATAAACTTATTGCGGCGTCTCAGCGCCTTCTACCCAAAGGCATAGCTTCTGTCATGTTTGGATTGGGGTTTGATCCCATTACAAAAGATTACAAGGTTGTTCAACTTTTACTTCCTCTTTTCGAGAATAAACGTCTGGTCGAAGTATATAATCTTAGTACTAATTCTTGGAGGGTATTAGATGTTGTTGTCCCAGATTTTGGATTATGTTATGATAATTGTACGTTTTATTTGAATGGAGCTTATCATTGGTTAGTTTTTGATGACTTGCATGGGATCAAAAGAGAGTTTATTTTGAGTTTCGATTTTAGCAACGAGGTGTTTGGGATGATCCAATTGCCACCTGCAGTTGATTCTTTACGTGGACCAGGCAATATTTTTGTACTTGATCGAAGTCTTGCTTTTGTTCAACATAGTTTCAGAACCCGAGAATTTAAGATTTGGGTGATGAATGAGTATGGTGTTGAAAGTAGCTGGACTGATAAGTTTGAGATTGGACGATTTCATGAGTTGAGATCCGTCTTAGGATCTTGGGGGGATAATGAAATTCTTATTGAAAACTTTGATGGTGAAGTAATTTCTTATAATCTTCAAAATCAACACATGCATGCTCCAAAAACGAATTGTGGTCTTGGCCATGATAGTGTGGTTCCTTTGATGGCAGAGGCCTATGGTTTTGACTATGTGGATAGTTTGGTTCCTTTGGCGGGGAGGAGGATATACAACAAAATATGA 1167 0.4062 MEEIFVSLPVKSLLRFKCVAKSWRALIADPSFIARHLERSRSTSKIPRLKLIFQLESFTRVPYISLISKDQPYCVPHHMEPLPRKEYRGFHGHCDGIFCLYVISVTEEDENENKLLNYLYPTKGGDNYLLDKSNLILWNPTTKEDKLIAASQRLLPKGIASVMFGLGFDPITKDYKVVQLLLPLFENKRLVEVYNLSTNSWRVLDVVVPDFGLCYDNCTFYLNGAYHWLVFDDLHGIKREFILSFDFSNEVFGMIQLPPAVDSLRGPGNIFVLDRSLAFVQHSFRTREFKIWVMNEYGVESSWTDKFEIGRFHELRSVLGSWGDNEILIENFDGEVISYNLQNQHMHAPKTNCGLGHDSVVPLMAEAYGFDYVDSLVPLAGRRIYNKI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00082 388 Pfam F-box domain 1 32 IPR001810 GO:0005515
Pral2456g00082 388 CDD F-box_AtFBW1-like 1 32 - -
Pral2456g00082 388 Gene3D - 1 32 - -
Pral2456g00082 388 SUPERFAMILY F-box domain 2 42 IPR036047 GO:0005515
Pral2456g00082 388 NCBIfam F-box protein interaction domain 131 332 IPR017451 -
Pral2456g00082 388 Pfam F-box associated 221 329 IPR006527 -
Pral2456g00082 388 PANTHER OS09G0372900 PROTEIN-RELATED 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00082 Pral-Chr2456 343512 344678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00082 192 298 Carbohydrate Esterase AT1G25141 26.168 2.65e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00082 - - pcin:129320976 280.026