Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00081 ATGCTAAGCCACGAACTTCCTGAAGATCTCATGAACGAGATCATCGTGAGGCTGCCTGTAAAATCCTTGCTTCGGTTTAAATGTGTAGCCAAATCCTGGTACGCTCTCATCACTGACTCTTGTTTTATTGCCGAACATCTTGAACGGTCTAGATCTATCAGCAAGAGTCGCCGCCTGAAGCTTATCTTCCAATTGGATAGGTTCACTCGGGTGCCCTACATATCCTTGATTTCTAAAGACCAACCTTATGTGCTGCATGATATAGAACCTCTCCCTCATAAGGAGTATTGGGGCTTTTATGGTCAATGTGATGGGATTTTTTGTCTGCACGTGATCAATATCAATGAAGAAGGTGATAATGAGCATAAGCGCAAATTTTGGGACCCAAAAAAAAAGGGATCTAGTCCGGATAAAGGCAACTTAATCCTTTGGAACCCAGCAACTAAAGAGGATAAGCTTATTCCGGTGTCTCAGTGCCTTCTACCTAAAGGCATAGATTCTGACATGTTTGGATTTGGGTTTGATCCCATTACAAAAGATTACAAGATTGTTCAAGTTTCAGATTGGCCTTTGGAAGGAGGAGAACATCTAGTTGAAGTATATAATCTTAGTACTGATTCTTGGAGGGTACTAGATGTTTTTGTCCCAGATTTTGAAATATGTTTTGGAGGTTGTACGTCTTATTTGAATGGAGTTTATTATTGGTTAGTTTTTGGCTTGAATGGGATCACAAGGAGCTCTATTTTGAGTTTCGATTTTGGCAAAGAGGTGTTTAGGATGATGCAATTGCCCCCCGCGATTGATTCTTTACATGGACCAATCGATGTTTTTGTTCTTGATCAAAGTCTTGCTTTTGCTATACATAGTTGTGCAACTCGAAAATCTAAGGTTTGGGTCATGAATGAGCATGGTGTTGAAAGTAGTTGGACTGAAAAGTTTGAGATCGGACCACTTGATGAGTTTGGATCCATCTTAGGATCTTGGAGGGATAATGAAATTCTTATTGACACATTTGATGGTCAAGTGATTTCTTATAATCTTCAAAATCAACACATATATATACATGCTCCAAAGATGAGTTACGGTTTTGCTATGTGGATAGTTTGGTTCGTTTGA 1116 0.3943 MLSHELPEDLMNEIIVRLPVKSLLRFKCVAKSWYALITDSCFIAEHLERSRSISKSRRLKLIFQLDRFTRVPYISLISKDQPYVLHDIEPLPHKEYWGFYGQCDGIFCLHVININEEGDNEHKRKFWDPKKKGSSPDKGNLILWNPATKEDKLIPVSQCLLPKGIDSDMFGFGFDPITKDYKIVQVSDWPLEGGEHLVEVYNLSTDSWRVLDVFVPDFEICFGGCTSYLNGVYYWLVFGLNGITRSSILSFDFGKEVFRMMQLPPAIDSLHGPIDVFVLDQSLAFAIHSCATRKSKVWVMNEHGVESSWTEKFEIGPLDEFGSILGSWRDNEILIDTFDGQVISYNLQNQHIYIHAPKMSYGFAMWIVWFV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00081 371 SUPERFAMILY F-box domain 5 67 IPR036047 GO:0005515
Pral2456g00081 371 CDD F-box_AtFBW1-like 5 42 - -
Pral2456g00081 371 Pfam F-box domain 5 41 IPR001810 GO:0005515
Pral2456g00081 371 Gene3D - 4 42 - -
Pral2456g00081 371 PANTHER OS09G0372900 PROTEIN-RELATED 6 327 - -
Pral2456g00081 371 Pfam F-box associated 229 337 IPR006527 -
Pral2456g00081 371 NCBIfam F-box protein interaction domain 139 347 IPR017451 -
Pral2456g00081 371 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Pral2456g00081 371 SMART fbox_2 6 46 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00081 Pral-Chr2456 338110 339225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00081 193 304 Carbohydrate Esterase AT1G25141 26.549 1.38e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00081 - - pcin:129320976 306.605