Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00080 ATGCTGAGCCACGAACTTCCTGAAGATCTCATGAACGAGATCATTGTGAGGCTGCCTGTAAAATCCTTGCTTCGGTTTAAATGTGTAGCCAAATCCTGGTACGCTCTCATCACTGACTCTTGTTTTATTGCCGAACATCTTGAACGGTCTAGATCTATCAGCAAGAGTCGCCGCCTGAAGCTTATCTTCCAATTGGATAGTTTCACTCGGGTGCCCTACATATCCTTGATTTCTAAAGACCAACCTTATGTGCTGCATGATATAGAACCTCTCCCTCATAAGGAGTATTGGGGCTTTTATGGTCAATGTGATGGGATTTTTTGTCTGCACGTGATCAATATCAATGAAGAAGGTGATAATGAGCATAAGCGCAAATTTTGGGACCCCAAAAACAAAGGATATAATCCGGATAAAGGCAACTTAATCCTTTGGAATCCAGCAACAAAAGAGGATAAGCTTATTCCGGTGTCTCAGTGCCTTCTACCTAAAAGCATAGCTTCTGTCATGTTTGGATTTGGGTTTGATCCCATTACAAAAGATTACAAGATTGTTCAAGTTTCAGATTGGCCTTTGGAAGGAGGAGTACGTCTAGTTGAAGTATATAATCTTAGTACTGATTCTTGGAGGGTACTAGATGTTGTTGTCCCAGATTTTGAAGTATGTTTTGGAGGTTGTACGTCTTATTTGAATGGAGTTTATTATTGGTTAGTTTTTGGCTTGAATGGGATCACCAGGAGCTCTATTTTGAGTTTCGATTTTGGCAAAGAGGTGTTTAGGATGATGCAATTGCCCCTCGCGATTGATTCTTTACATGGACCAAGCGATGTTTTTGTACTTGATCAAAGTCTTGCTTTTGTTAAACATAGTTATGCAACTCGAAAATCTAAGGTTTGGGTCACGAATGAGCATGGTGTTGAAAGTAGTTGGACTGAAAAGTTTGAGATCGGACCACTTGATGAGTTTCAATCCATCTTAGGATCTTGGAGGGATAATGAAATTCTTATTGACACATTTGGTGGTCAAATGATTTCCTATAATCTTCAAAATCAACACATAAATGCTCCAAAAATGAGTTATGATTTTGGCCATGTGGATAGTTTGGTTCCTTTGATAGAAGAGATCTTTGGTTTTGACTATGTGGATAGTTTGGTTCCTTTGGTGGGGGGGAGGAAACACAACAAAATATGA 1188 0.3948 MLSHELPEDLMNEIIVRLPVKSLLRFKCVAKSWYALITDSCFIAEHLERSRSISKSRRLKLIFQLDSFTRVPYISLISKDQPYVLHDIEPLPHKEYWGFYGQCDGIFCLHVININEEGDNEHKRKFWDPKNKGYNPDKGNLILWNPATKEDKLIPVSQCLLPKSIASVMFGFGFDPITKDYKIVQVSDWPLEGGVRLVEVYNLSTDSWRVLDVVVPDFEVCFGGCTSYLNGVYYWLVFGLNGITRSSILSFDFGKEVFRMMQLPLAIDSLHGPSDVFVLDQSLAFVKHSYATRKSKVWVTNEHGVESSWTEKFEIGPLDEFQSILGSWRDNEILIDTFGGQMISYNLQNQHINAPKMSYDFGHVDSLVPLIEEIFGFDYVDSLVPLVGGRKHNKI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00080 395 PANTHER OS09G0372900 PROTEIN-RELATED 6 324 - -
Pral2456g00080 395 CDD F-box_AtFBW1-like 5 42 - -
Pral2456g00080 395 Pfam F-box domain 5 41 IPR001810 GO:0005515
Pral2456g00080 395 SUPERFAMILY F-box domain 5 52 IPR036047 GO:0005515
Pral2456g00080 395 Gene3D - 4 42 - -
Pral2456g00080 395 NCBIfam F-box protein interaction domain 139 333 IPR017451 -
Pral2456g00080 395 Pfam F-box associated 229 336 IPR006527 -
Pral2456g00080 395 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Pral2456g00080 395 SMART fbox_2 6 46 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00080 Pral-Chr2456 329765 330952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00080 199 304 Carbohydrate Esterase AT1G25141 27.103 7.09e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00080 - - pcin:129320976 300.827