Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00054 ATGCCGCTTCAGAGTCATGCATCCGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCCTGAGCATCACGCTCTCCGGCCGCCTCCAATTCGAACCCTTGATCGTCCTGCTCAACCAGAGGATAAACGAGACGGTCGTGATAAAAATGAAGGGCAGCATGATGATGACGACGACGATGATGAGGAGAAGAAGCACCGGGAACGAGTCTGTGAAGAACCGTCTAGCGAGTTACGGAATTGTAAACCTACGGATGAGGAGGCAGAGCCGCAAGAATCTGCTTCAGAAACCCTAGCTACTCCCTCTTCGGTTGAAACGGTGGTGGCCAGTAAGAGTGCTGATTTGCAAGCCAGCTCTAGTACGCGGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGGGCCTTCAAAGATGGAAATTATTGTAAGAGAAACAGTTCAGGGAGCTTGTAATCAGACAGAAGATCGACTTGCGGTGTCTGTATATCCAACTCCGTTGTCCGTGCTATCACCATCTTTTGTTACACAACCTTTATCATCTGTTCCTAGTTCAACTGTATCAGAACAAATACCATCTCCTCAGAATGCTAATAATGGGCACACGCCGGGAACAGGCAAGAAAAATTCTTCTGGTGGTAAAGCTCTTTCTGCTGTTAATGTTGCAAGGGCATCTGCATCTGACGGATACAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTAGTGCAAAGAAGATTGAATTTTGCGATCAGTCAGGGCATATGATAGAGATCATTTATAAAGGTCAACACAGCCATGAGCCACTACGGAAGACTAACACCACTGGGGAAATTAAGTTCATGCCATCTCGTGAACCTACAGTAGAAGCCAATCTTCCGGAACAGACCATTGGAGGGCTTAAGGATGCAGATCCAACCTCTTCTACAAAAGAAAGTCTACAACATTTACCGTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAAGTTATTCTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAAGAAGCAGAGTGAAGAATGGTGACTTAACAAACTTGGACTCGCATGTGGGACCTGGAAAGAAATCTAAGTTTGTTGTACATGCAGCAGGGGATGTTGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTCAGAGGAAATTCCCATCCCAGCATTCTAATGCCTGTCTAG 1296 0.4622 MPLQSHASDPIKRLSSLFRTIPYAAMPEHHALRPPPIRTLDRPAQPEDKRDGRDKNEGQHDDDDDDDEEKKHRERVCEEPSSELRNCKPTDEEAEPQESASETLATPSSVETVVASKSADLQASSSTRIDGRDESKEPNGPSKMEIIVRETVQGACNQTEDRLAVSVYPTPLSVLSPSFVTQPLSSVPSSTVSEQIPSPQNANNGHTPGTGKKNSSGGKALSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCSAKKIEFCDQSGHMIEIIYKGQHSHEPLRKTNTTGEIKFMPSREPTVEANLPEQTIGGLKDADPTSSTKESLQHLPCSADKKRQNSSGLSENGKVILKVEHVDEPELKRSRVKNGDLTNLDSHVGPGKKSKFVVHAAGDVGISGDGYRWRKYGQKMVRGNSHPSILMPV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00054 431 MobiDBLite consensus disorder prediction 181 219 - -
Pral2456g00054 431 SUPERFAMILY WRKY DNA-binding domain 229 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 SUPERFAMILY WRKY DNA-binding domain 401 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 Gene3D WRKY domain 218 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 MobiDBLite consensus disorder prediction 42 95 - -
Pral2456g00054 431 Pfam WRKY DNA -binding domain 233 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 Pfam WRKY DNA -binding domain 407 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 MobiDBLite consensus disorder prediction 322 354 - -
Pral2456g00054 431 Gene3D WRKY domain 392 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 MobiDBLite consensus disorder prediction 99 126 - -
Pral2456g00054 431 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 196 425 IPR044810 GO:0003700
Pral2456g00054 431 MobiDBLite consensus disorder prediction 316 354 - -
Pral2456g00054 431 ProSiteProfiles WRKY domain profile. 226 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00054 431 MobiDBLite consensus disorder prediction 25 145 - -
Pral2456g00054 431 ProSiteProfiles WRKY domain profile. 400 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00054 Pral-Chr2456 226784 229805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00054 135 425 WRKY Transcription Factor Family AT4G30935 42.671 3.51e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2456g00054 WRKY 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00054 - - pcin:129320486 692.96