Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2456g00053 | ATGCCGCTTCAGAGTCATGCATCCGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCCTGAGCATCACGCTCTCCGGCCGCCTCCAATTCGAACCCTTGATCGTCCTGCTCAACCAGAGGATAAACGAGACGGTCGTGATAAAAATGAAGGGCAGCATGATGATGACGACGACGATGATGAGGAGAAGAAGCACCGGGAACGAGTCTGTGAAGAACCGTCTAGCGAGTTACGGAATTGTAAACCTACGGATGAGGAGGCAGAGCCGCAAGAATCTGCTTCAGAAACCCTAGCTACTCCCTCTTCGGTTGAAACGGTGGTGGCCAGTAAGAGTGCTGATTTGCAAGCCAGCTCTAGTACGCGGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGGGCCTTCAAAGATGGAAATTATTGTAAGAGAAACAGTTCAGGGAGCTTGTAATCAGACAGAAGATCGACTTGCGGTGTCTGTATATCCAACTCCGTTGTCCGTGCTATCACCATCTTTTGTTACACAACCTTTATCATCTGTTCCTAGTTCAACTGTATCAGAACAAATACCATCTCCTCAGAATGCTAATAATGGGCACACGCCGGGAACAGGCAAGAAAAATTCTTCTGGTGGTAAAGCTCTTTCTGCTGTTAATGTTGCAAGGGCATCTGCATCTGACGGATACAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTAGTGCAAAGAAGATTGAATTTTGCGATCAGTCAGGGCATATGATAGAGATCATTTATAAAGGTCAACACAGCCATGAGCCACTACGGAAGACTAACACCACTGGGGAAATTAAGTTCATGCCATCTCGTGAACCTACAGTAGAAGCCAATCTTCCGGAACAGACCATTGGAGGGCTTAAGGATGCAGATCCAACCTCTTCTACAAAAGAAAGTCTACAACATTTACCGTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAAGTTATTCTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAAGAAGCAGAGTGAAGAATGGTGACTTAACAAACTTGGACTCGCATGTGGGACCTGGAAAGAAATCTAAGTTTGTTGTACATGCAGCAGGGGATGTTGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTCAGAGGAAATTCCCATCCCAGAAATTACTACAGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTAGATGATCCTACTGCTGTCATCATTACATATAAAGGAGCACATAACCATGACCAGCCTGTGCCCAGGAAACGACAAGGCCCACCAAGTGCTCCTCTTGTGGCTACTATTGCCCCTGCTTCGTCAAACAACTTGGACCTCAAGAGTACTGATTCACTGCAAAACCAAGAAAATTCTGCTCAGTGGTCGGAGGACTCTGAAGAAGAATTAACTGAAGATGCTTCCGACCTCGGGGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTAAGCATGGGTGAAATTAAGCCTTGCTGA | 1632 | 0.4638 | MPLQSHASDPIKRLSSLFRTIPYAAMPEHHALRPPPIRTLDRPAQPEDKRDGRDKNEGQHDDDDDDDEEKKHRERVCEEPSSELRNCKPTDEEAEPQESASETLATPSSVETVVASKSADLQASSSTRIDGRDESKEPNGPSKMEIIVRETVQGACNQTEDRLAVSVYPTPLSVLSPSFVTQPLSSVPSSTVSEQIPSPQNANNGHTPGTGKKNSSGGKALSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCSAKKIEFCDQSGHMIEIIYKGQHSHEPLRKTNTTGEIKFMPSREPTVEANLPEQTIGGLKDADPTSSTKESLQHLPCSADKKRQNSSGLSENGKVILKVEHVDEPELKRSRVKNGDLTNLDSHVGPGKKSKFVVHAAGDVGISGDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQIETAVDDPTAVIITYKGAHNHDQPVPRKRQGPPSAPLVATIAPASSNNLDLKSTDSLQNQENSAQWSEDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC | 543 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2456g00053 | 543 | Gene3D | WRKY domain | 390 | 466 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | Gene3D | WRKY domain | 218 | 290 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 487 | 525 | - | - | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 181 | 219 | - | - | |
Pral2456g00053 | 543 | FunFam | WRKY transcription factor | 391 | 466 | - | - | |
Pral2456g00053 | 543 | SMART | WRKY_cls | 405 | 464 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | SMART | WRKY_cls | 231 | 289 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 487 | 506 | - | - | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 42 | 95 | - | - | |
Pral2456g00053 | 543 | SUPERFAMILY | WRKY DNA-binding domain | 401 | 465 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | Pfam | WRKY DNA -binding domain | 233 | 288 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | Pfam | WRKY DNA -binding domain | 407 | 462 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 322 | 354 | - | - | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 99 | 126 | - | - | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 316 | 354 | - | - | |
Pral2456g00053 | 543 | ProSiteProfiles | WRKY domain profile. | 226 | 290 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | SUPERFAMILY | WRKY DNA-binding domain | 229 | 288 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | MobiDBLite | consensus disorder prediction | 25 | 145 | - | - | |
Pral2456g00053 | 543 | ProSiteProfiles | WRKY domain profile. | 400 | 465 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral2456g00053 | 543 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 196 | 507 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2456g00053 | Pral-Chr2456 | 225397 | 229805 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2456g00053 | 135 | 543 | WRKY Transcription Factor Family | AT4G30935 | 48.009 | 1.52e-107 | 328 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pral2456g00053 | WRKY | 3.5e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2456g00053 | - | - | pcin:129320486 | 882.863 |