Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00051 ATGCCGCTTCAGAGTCATGCATCCGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCCTGAGCATCACGCTCTCCGGCCGCCTCCAATTCGAACCCTTGATCGTCCTGCTCAACCAGAGGATAAACGAGACGGTCGTGATAAAAATGAAGGGCAGCATGATGATGACGACGACGATGATGAGGAGAAGAAGCACCGGGAACGAGTCTGTGAAGAACCGTCTAGCGAGTTACGGAATTGTAAACCTACGGATGAGGAGGCAGAGCCGCAAGAATCTGCTTCAGAAACCCTAGCTACTCCCTCTTCGGTTGAAACGGTGGTGGCCAGTAAGAGTGCTGATTTGCAAGCCAGCTCTAGTACGCGGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGGGCCTTCAAAGATGGAAATTATTGTAAGAGAAACAGTTCAGGGAGCTTGTAATCAGACAGAAGATCGACTTGCGGTGTCTGTATATCCAACTCCGTTGTCCGTGCTATCACCATCTTTTGTTACACAACCTTTATCATCTGTTCCTAGTTCAACTGTATCAGAACAAATACCATCTCCTCAGAATGCTAATAATGGGCACACGCCGGGAACAGGCAAGAAAAATTCTTCTGGTGGTAAAGCTCTTTCTGCTGTTAATGTTGCAAGGGCATCTGCATCTGACGGATACAACTGGCGCAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTAGTGCAAAGAAGATTGAATTTTGCGATCAGTCAGGGCATATGATAGAGATCATTTATAAAGGTCAACACAGCCATGAGCCACTACGGAAGACTAACACCACTGGGGAAATTAAGTTCATGCCATCTCGTGAACCTACAGTAGAAGCCAATCTTCCGGAACAGACCATTGGAGGGCTTAAGGATGCAGATCCAACCTCTTCTACAAAAGAAAGTCTACAACATTTACCGTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAAGTTATTCTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAAGAAGCAGAGTGAAGAATGGTGACTTAACAAACTTGGACTCGCATGTGGGACCTGGAAAGAAATCTAAGTTTGTTGTACATGCAGCAGGGGATGTTGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTCAGAGGAAATTCCCATCCCAGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTAGATGATCCTACTGCTGTCATCATTACATATAAAGGAGCACATAACCATGACCAGCCTGTGCCCAGGAAACGACAAGGCCCACCAAGTGCTCCTCTTGTGGCTACTATTGCCCCTGCTTCGTCAAACAACTTGGACCTCAAGAGTACTGATTCACTGCAAAACCAAGAAAATTCTGCTCAGTGGTCGGAGGACTCTGAAGAAGAATTAACTGAAGATGCTTCCGACCTCGGGGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTAAGCATGGGTGAAATTAAGCCTTGCTGA 1620 0.4654 MPLQSHASDPIKRLSSLFRTIPYAAMPEHHALRPPPIRTLDRPAQPEDKRDGRDKNEGQHDDDDDDDEEKKHRERVCEEPSSELRNCKPTDEEAEPQESASETLATPSSVETVVASKSADLQASSSTRIDGRDESKEPNGPSKMEIIVRETVQGACNQTEDRLAVSVYPTPLSVLSPSFVTQPLSSVPSSTVSEQIPSPQNANNGHTPGTGKKNSSGGKALSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCSAKKIEFCDQSGHMIEIIYKGQHSHEPLRKTNTTGEIKFMPSREPTVEANLPEQTIGGLKDADPTSSTKESLQHLPCSADKKRQNSSGLSENGKVILKVEHVDEPELKRSRVKNGDLTNLDSHVGPGKKSKFVVHAAGDVGISGDGYRWRKYGQKMVRGNSHPRCTSAGCPVRKQIETAVDDPTAVIITYKGAHNHDQPVPRKRQGPPSAPLVATIAPASSNNLDLKSTDSLQNQENSAQWSEDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00051 539 MobiDBLite consensus disorder prediction 181 219 - -
Pral2456g00051 539 Pfam WRKY DNA -binding domain 233 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 Pfam WRKY DNA -binding domain 407 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 MobiDBLite consensus disorder prediction 483 502 - -
Pral2456g00051 539 SUPERFAMILY WRKY DNA-binding domain 401 461 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 MobiDBLite consensus disorder prediction 42 95 - -
Pral2456g00051 539 MobiDBLite consensus disorder prediction 322 354 - -
Pral2456g00051 539 MobiDBLite consensus disorder prediction 99 126 - -
Pral2456g00051 539 SUPERFAMILY WRKY DNA-binding domain 229 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 MobiDBLite consensus disorder prediction 316 354 - -
Pral2456g00051 539 ProSiteProfiles WRKY domain profile. 400 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 SMART WRKY_cls 405 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 Gene3D WRKY domain 218 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 Gene3D WRKY domain 390 462 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 ProSiteProfiles WRKY domain profile. 226 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2456g00051 539 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 196 503 IPR044810 GO:0003700
Pral2456g00051 539 MobiDBLite consensus disorder prediction 25 145 - -
Pral2456g00051 539 MobiDBLite consensus disorder prediction 483 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00051 Pral-Chr2456 224975 229805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00051 135 539 WRKY Transcription Factor Family AT4G30935 47.073 2.91e-101 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2456g00051 WRKY 1.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00051 - - pcin:129320486 867.455