Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00040 ATGGGATTTGAAATAAGCAAAGGCTGGATCTTGTTTCTTGTGTGGTGGTTACTGTTATTATTGGCTTGTTCATGGTGTCTGGAGGATGATCGAATAAAGGAGTTGCCGGGGCAGCCGCCGGTGGGGTTCAGTCAATTCTCCGGCTACGTCACCGTGAACCGCCGACATGGGCGAGCTTTGTTCTACTGGCTTACTGAGTCTACCTATTCCCCGCGCAATAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGTTGCTCATCTGTAGCGTATGGGGCATCAGAGGAAATTGGTCCCTTTCGGATAAACAAAAGGGGGTCTTCCCTATATCTTAACAAATATGCATGGAACAGAGAAGCAAATATCCTTTTTCTTGAATCACCTGCTGGTGTTGGTTTCTCCTACACAAATACAAGCTCGGACCTCAAAACTACAGGGGACAAAAGGACAGCTCAAGATGCACTGATTTTTTTAATTAGATGGATGTCAAGGTTTCCACACTATAAAGACAGAGAGTTTTACATCGCTGGAGAGAGCTATGCAGGGCATTACATACCCCAGTTGGCTAAGCAAATTTATGACTATAATAAAGCACATCCACATATCATGAATCTAAAAGGGTTCATCGTGGGAAATGCTGTAACCGATGACTATTATGATGGGATCGGAACTATCACATATTGGTGGAGCCATGCTTTGATATCTGATCTCTCATACCATTCAATCCTCAAATACTGCAATTTCACATCAGAAAAGACTTCCAAAAAATGTGATGATGCAGTGAGTTATGCAGTTAACCATGAATTTGGAAAAATTGATACATACAGTATTTATACCCCAACATGCCCAACTCGGCATAACAATACCTTAAGATATATAAGGTTTAAGAGTACAATCTTACATAGGGTTTCAGGGTATGATCCATGTACTGAAGATCGTGCAGAAAAATATTATAACCGTCCTGAAGTGCAGCAAGCAATGCATGCAAATGTTACAAGCATCCCTTACAAGTGGACTGCTTGCAGTAATGTGCTCACAAGAAACTGGAAGGATTCTCCAGTTTCTGTATTGCCTATATACAAAGAGTTGATTGCGGCTGGGTTAAGAATATGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTGACAGCCACCAGGTTTTCCCTCAACCATCTCAATCTCACCATTAAAACCCGTTGGTATCCGTGGTACTCAGGTGGACAGGTAGGCGGATGGACAGAGGTGTATGAAGGGCTCACGTTTGCCGCTGTGAGAGGAGCTGGACACGAAGTACCATTATTTCAGCCTAGGCGAGCATTCACACTCTTCAAGTCTTTCTTAGCAGGGAAGGAGCTACCAAAGTCTTAA 1371 0.4369 MGFEISKGWILFLVWWLLLLLACSWCLEDDRIKELPGQPPVGFSQFSGYVTVNRRHGRALFYWLTESTYSPRNKPLVLWLNGGPGCSSVAYGASEEIGPFRINKRGSSLYLNKYAWNREANILFLESPAGVGFSYTNTSSDLKTTGDKRTAQDALIFLIRWMSRFPHYKDREFYIAGESYAGHYIPQLAKQIYDYNKAHPHIMNLKGFIVGNAVTDDYYDGIGTITYWWSHALISDLSYHSILKYCNFTSEKTSKKCDDAVSYAVNHEFGKIDTYSIYTPTCPTRHNNTLRYIRFKSTILHRVSGYDPCTEDRAEKYYNRPEVQQAMHANVTSIPYKWTACSNVLTRNWKDSPVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTRWYPWYSGGQVGGWTEVYEGLTFAAVRGAGHEVPLFQPRRAFTLFKSFLAGKELPKS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00040 456 Gene3D - 356 450 - -
Pral2456g00040 456 Pfam Serine carboxypeptidase 37 449 IPR001563 GO:0004185|GO:0006508
Pral2456g00040 456 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Pral2456g00040 456 FunFam Carboxypeptidase 27 284 - -
Pral2456g00040 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 437 IPR001563 GO:0004185|GO:0006508
Pral2456g00040 456 Gene3D alpha/beta hydrolase 26 284 IPR029058 -
Pral2456g00040 456 Gene3D - 309 346 - -
Pral2456g00040 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Pral2456g00040 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Pral2456g00040 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Pral2456g00040 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Pral2456g00040 456 FunFam Carboxypeptidase 356 450 - -
Pral2456g00040 456 SUPERFAMILY alpha/beta-Hydrolases 32 453 IPR029058 -
Pral2456g00040 456 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Pral2456g00040 456 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Pral2456g00040 456 FunFam Carboxypeptidase 305 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00040 Pral-Chr2456 161911 168073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00040 314 453 Calmodulin-binding Proteins AT2G22960 29.787 7.02e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00040 K16297 - gmx:100785391 764.222