Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00032 ATGCAGCAAGGTGATCAGACGGTGATTAGCTTGAGGCCTGGTGGAGGTCGTCCCGGCGGCGGTAGCAGGTTCTCATCCTCATCGGCTTCCTCTGCTTCTCCTGCTTTTGGTTCCTTTGCCTCTGATCCTTCTCTCCTCCGTCCCCATGGCGGTGTTCCTTCTTTTTCCATTAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCAATACACTAGGGATCAGCTTTTACAACTGAGGGAGGTTGTGGAGATCCCTGAAGATATTTTAAAAATTAAACAAGATATAGAAACTGAACTTTTTGGTGAAGATCAAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTTCAAAATCGATACTCTGAGCCAGACAACCGTGATTGGCGTGGGCGGTCTGGGCAGCTTCCTGCTTCTGCAGAAGAGAAGTCATGGGAAAACCTGAGAGAAAATAGGGAGTTTGGAAATCGGTTTGATTCAAGGCAGCAGGATTCTAGTCAGTTCAATCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCACAGATTTCTTCTAACCAAGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATCGGTCAATGGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACTGTTAAAGGAATTCTAAACAAGCTTACGCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGGAGTCATTTCACTTATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGATGGGAAAGAAATCACTTTTAAGCGAGTAGTACTGAATAACTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTGAGGGAGGAGGTGAGGCAGATGACTGCTCCCGAGCAGGAGATGGAGCGTAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGTAACATCCGATTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGAGCTGACAGCAAGTCCTGTCCAGTTGAGGAAAATGTTGAAGCAATATGTCAGTTTTTCAATACTATTGGTAAAACTGATGATGAAAGCCAAAAATCAAGGCGTATTAATGACATGTACTTTAGCCGATTGAAAGAACTGAGCTCAAACCCCCAACTCGTATCACGGTTGAGGTTCATGTTCATGTGTGATGTTCTAGATTTACGTTCTAATAATTGGGTTCCAAGACGTGAAGAGAGCTAACTACTTGTGTAGGTGAAAGCGAAAACCATCACTGAAATTCATTCAGAAGCGGAAAAGAATCTTGGATTGCGGCCAGGTGCTACTGCAAGCATTAGAAATAACCGTGCTGCAGCTTCTGGTGTTCAAGGAAGTATGAGCCCTGGTGGGTTTCCAATTGCTCGACCTGGTACAGGAGGTATGATGCCTGGAATGCCAGGAACCAGGAAGATGCCTGGGCTGCCTGGAATTGATAGTGACAACTGGGAAATGCCTAGGACACGATCAATGCCAAGAGGAGACATGTCAGGCATGCAAGCTGCAGGACGTGGTCAGTCCCCTTTACTTTCAAAATCATCAGCCCTGAACCCAAAGCTATTACCTCAAGGTAGTGGTGGTCTTATAAGTGGAAGAAGCAGTGCCTTAGTGCATGGTGGTGGTGCGCCTCCTTCTCGTCCATCAAACTTTGTTTCTGGTGCTGAGCCTCCATCTCAAATCCCTACATCTGTGAAAGCTGGCCCCAGTGGGTCCTTCGAGAAGCCACAGACTGCCCCAAAATTGAACCTTGATGATCTTCGCCGCAAAACTGTCTCTCTTCTGGAAGAATATTTCAGTATTCGTCTTTTAGATGAGGCAATGCAATGCGTGGAAGAACTAAAGGCCCCATCCTACCACCCTGAGTTTGTTAAGGAGGCTATTTCCCTTGCACTAGATAAAAGTCCACCCTGTGTTGATATTGTCGCCAATCTTCTTGAGTATCTTTTTATTAAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTTTGTTGTTTGGTTCCATGCTAGATGACATCGGCATAGATTTACCTAAAGCACCGAATAATTTTGGTGAGATAATTGGGAAGATAATTTTGGCTGGGGGATTGGATTTTAAGGTAGTAGCAGAGATCCTTAAGAAGGTGGAAGATGACTGGTTCCAGAAAGCCATATTTGATGCTGCAATAAAGACCATCGGTTCCGCATCCGGGCAAGCTCTTTTGGATTCACAAGCCTCCGATATCGAGGCTTGCCGCAGTGTGCTCAAGTAA 2400 0.4542 MQQGDQTVISLRPGGGRPGGGSRFSSSSASSASPAFGSFASDPSLLRPHGGVPSFSIKAGDSRFEGRERVQYTRDQLLQLREVVEIPEDILKIKQDIETELFGEDQSWGRAENSAQQFQNRYSEPDNRDWRGRSGQLPASAEEKSWENLRENREFGNRFDSRQQDSSQFNRQDQLNSQFARAQISSNQGGPAPTLVKAEVPSVNGRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPDGKEITFKRVVLNNCQEAFEGADKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADSKSCPVEENVEAICQFFNTIGKTDDESQKSRRINDMYFSRLKELSSNPQLVSRLRFMFMCDVLDLRSNNWVPRREESXLLVXVKAKTITEIHSEAEKNLGLRPGATASIRNNRAAASGVQGSMSPGGFPIARPGTGGMMPGMPGTRKMPGLPGIDSDNWEMPRTRSMPRGDMSGMQAAGRGQSPLLSKSSALNPKLLPQGSGGLISGRSSALVHGGGAPPSRPSNFVSGAEPPSQIPTSVKAGPSGSFEKPQTAPKLNLDDLRRKTVSLLEEYFSIRLLDEAMQCVEELKAPSYHPEFVKEAISLALDKSPPCVDIVANLLEYLFIKKILTARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKIILAGGLDFKVVAEILKKVEDDWFQKAIFDAAIKTIGSASGQALLDSQASDIEACRSVLK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00032 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 628 789 - -
Pral2456g00032 799 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 44 784 IPR045208 GO:0003743
Pral2456g00032 799 Pfam MIF4G domain 216 442 IPR003890 GO:0003723|GO:0005515
Pral2456g00032 799 MobiDBLite consensus disorder prediction 600 619 - -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 109 123 - -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 1 59 - -
Pral2456g00032 799 SUPERFAMILY ARM repeat 208 445 IPR016024 -
Pral2456g00032 799 SUPERFAMILY ARM repeat 628 775 IPR016024 -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 108 197 - -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 161 192 - -
Pral2456g00032 799 Gene3D - 207 443 - -
Pral2456g00032 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 207 443 - -
Pral2456g00032 799 Pfam MA3 domain 635 747 IPR003891 -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 490 627 - -
Pral2456g00032 799 SMART ma3_7 635 747 IPR003891 -
Pral2456g00032 799 Gene3D - 627 793 - -
Pral2456g00032 799 SMART if4_15 216 442 IPR003890 GO:0003723|GO:0005515
Pral2456g00032 799 MobiDBLite consensus disorder prediction 144 160 - -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 553 569 - -
Pral2456g00032 799 ProSiteProfiles MI domain profile. 634 756 IPR003891 -
Pral2456g00032 799 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00032 Pral-Chr2456 132317 138502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00032 1 797 Eukaryotic Initiation Factors Gene Family AT5G57870 64.392 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00032 K03260 - qsa:O6P43_022212 1198.34