Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2456g00014 ATGTTTCTATTCTTCTATCTTGTCATTTTTCGCTTTGGTGGGGTTGCCGGTGGGGAAGAAAATGCTCGCGAAGTGACTGATGGAATTTCACTAAGAAATTTCATGTCAGGGATTGTTTCAGACCCAGAAAACTCTCTAGCTAGTTGGAGATCTCCTGGGGTTCCGTTTTGTAATTGGTCTGGAATTGTATGTAACAATGTGAGTGGGGAAGTTACAGGGATTCATCTTGGAAGGAGGTCACTAGGGGGTATAATTTCCCCTGCTCTTGGTAACCTCTCTGCTTTGAAAGTTCTTGATCTTTCTGAAAACTTTTTTGTGGGTCATATCCCAAAAGAGTTGGGGTGCTTAGTTCAGCTTGAAAAGCTCAGTCTGTATTGGAATCTTCTAGATGGGACGATCCCTTTAGAGCTGGGTTCACTTCACCGCTTACGCCACTTAGACATAGGAAGTAATATGCTTGAGGGGATGATTCCACCTTCATTGTTCTGCAATTTGTCATCCTCACTGACAGATTTAGACCTATCTAACAATTCACTAGTTGGACAAATCCCCTTGAATAATGAGTGTGTGCTTTATGAGCTTAAGTATCTCTTAGTCTGGTCTAACCATCTTGTGGGACAAGTTCCTCTAGCTCTTTCAAACTCCACAAAGCTCAAATGGATTGATTTGGGATCGAACATGTTTAGTGGTGAGCTACCATCAAAGATTATAGGTAATTGGCCACATTTACAATATTTCTACTTATCCTCCAATGACTTTGTTGGCCATAATGGCAATATCAATCTTGAACCATTCTTTGCCTCCTTAGTTAATTTGACCAAACTTCAAGTGCTTGAACTGGATGGAAACTATCTTGGGGGGAGGCTACCTCGTATAATTGGAGATCTTCCAACATCATTGATACAGCTTCATCTTGAGGACAATCTCATATATGGTTCCATTCCCTCACACATTGCCAACCTTGTCAGTCTAACTCTATTAAACTTGTCCAATAACCAACTAAATGGATCAATCCCTCCAAACCTATCCCTGATGAGTAAGCTTGAGAGAGTTTTTTTGTCCAATAATTCATTATCTGGTGAGATTCCTCCAACCATTGGTCATATTCAGCATCTGGGTCTGTTAGATTTGTCAAGAAACAAGATTTCTGGTTCAATACCAGATAATTTTGCCAATCTTTCCCAGTTAAGAAGGCTTTCACTTTATGATAACCAGCTTTCTGGAACAATACCACCAAGCCTTGGAAAGTGTGTCAATTTGGAGATTTTAGACCTATCTCACAACAAGATTTCTGGGGTGATTCCTACAGAAGTTGCAGCCTTAACTAACTTGAAATTATACTTGAATTTGTCAAGCAATAACTTAGATGGGCCTCTGCCATTAGAGCTCAGCAAAATGGACATGGTTCTAGCGATCGATCTATCTATGAACAACCTCTCCGGTAGAATCCCACCACAGTTTGAAAGTTGCATAGCACTTGAGTATCTTAACCTTTCAGGTAATTCTTTAGAAGGCCCTCTTCCATATTCTTTAGGCCAATTGCCTTACATTCAAGCACTAGACGTGTCTTTGAATCAATTGACTGGGGAGATACCTCAATCCCTTCAGCTGTCTTCTACTCTCAAAGAACTCAATTTCTCTTTCAACAAATTCTCAGGGAGCGTCTCAATTGGGGGAGCATTTTCGTCTCTCACCATAGACTCTTTTCGAGCAAATGATGGCCTTTGTGGCTCAGTAAAAGGCTTGCCTAGCTGCCATAAGAAGCAGAGCCATCATTTGATTCTCATGTCAATTCTTGTGTTACTCTTTGGCACCCCCATGTTCTGCATGTTTAGGCTCAATTCAGGAGTCCAAAAGAAACTAGCCATTGCTAGCGTGGGAAACTCGGAACGCGAAGAGGATAGAAAAGAGCTCAGTTACCCAAGAATTTCACATAAACAACTTGTTGAAGCCACTGGGGGCTTCAATGCTTCAAACTTGATTGGTTCAGGTCGGTTTGGAAAAGTCTATAAGGGAGTCCTCCAGGACAATACAAGAATAGCAGTGAAAGTATTAAATGCTACCACTGCTGGTGATATTTCAGGGAGCTTTAAAAGGGAATGCCAGATCCTAAAAAAGACTAGGCACAGAAACTTAATAAGGATCATCAAAATTTGCAATAAGCCGGAGTTTAAGGCTCTTGTTCTTCAACTAATGCCAAATGGTAGCCTCGAGAGGCACCTATATCCGAGCAGTGGTTTGAGCCGGAGGTTGGATCTTCCTCAGTTAGTGAGGATCTGCAGTGATGTAGCTGAGGGAATGGCTTATCTCCACCATTACTCTCCAGTTATAGTGGTTCATTGTGATCTTAAGCCAAGTAATATACTTCTTGATGATGATATGACAGCTCTGGTGACAGATTTTGGAATTTCAAGGCTTGTTAAATGTGATGAGGGCAACCCCTCCAATAACTCAACATCTTTCAGTTCGACACAAGGCTTGCTATTGGGCTCTATTGGCTACATAGCCCCTGAGTATGGAATGGGAAAATATGCCTCAACTAAAGGTGATGTCTACAGTTTTGGAGTAGTTCTGCTAGAAATTGTGACAGGCAGGCCCCCCACAGATGTCCTTATCCATGAAGGTTCTAGCTTGCATGAATGGGTTAAGAGACAGTATCCACGCAAGCTTGAAGCCATTGTGAAACAAGCATTGGAAAGGCACTTTCCTTTAAGCCTCCCTTCAGAGCGACATAACAGAATCTGGCAAGATGTAATAATGGAACTCATAGAGCTGGGCCTTATCTGCACACAGAACAATCCTTCAAGGAGACCAAGCATGCTGGATGTAGCTCAAGAACTTGGGAGGTTGAAAGACTACTTGTCTAATCCATCACATCATATGACTGAAGAAGTCAATTGCAAGGGTGATATCCTTTCTACTGTGAAAGCATAG 2934 0.4175 MFLFFYLVIFRFGGVAGGEENAREVTDGISLRNFMSGIVSDPENSLASWRSPGVPFCNWSGIVCNNVSGEVTGIHLGRRSLGGIISPALGNLSALKVLDLSENFFVGHIPKELGCLVQLEKLSLYWNLLDGTIPLELGSLHRLRHLDIGSNMLEGMIPPSLFCNLSSSLTDLDLSNNSLVGQIPLNNECVLYELKYLLVWSNHLVGQVPLALSNSTKLKWIDLGSNMFSGELPSKIIGNWPHLQYFYLSSNDFVGHNGNINLEPFFASLVNLTKLQVLELDGNYLGGRLPRIIGDLPTSLIQLHLEDNLIYGSIPSHIANLVSLTLLNLSNNQLNGSIPPNLSLMSKLERVFLSNNSLSGEIPPTIGHIQHLGLLDLSRNKISGSIPDNFANLSQLRRLSLYDNQLSGTIPPSLGKCVNLEILDLSHNKISGVIPTEVAALTNLKLYLNLSSNNLDGPLPLELSKMDMVLAIDLSMNNLSGRIPPQFESCIALEYLNLSGNSLEGPLPYSLGQLPYIQALDVSLNQLTGEIPQSLQLSSTLKELNFSFNKFSGSVSIGGAFSSLTIDSFRANDGLCGSVKGLPSCHKKQSHHLILMSILVLLFGTPMFCMFRLNSGVQKKLAIASVGNSEREEDRKELSYPRISHKQLVEATGGFNASNLIGSGRFGKVYKGVLQDNTRIAVKVLNATTAGDISGSFKRECQILKKTRHRNLIRIIKICNKPEFKALVLQLMPNGSLERHLYPSSGLSRRLDLPQLVRICSDVAEGMAYLHHYSPVIVVHCDLKPSNILLDDDMTALVTDFGISRLVKCDEGNPSNNSTSFSSTQGLLLGSIGYIAPEYGMGKYASTKGDVYSFGVVLLEIVTGRPPTDVLIHEGSSLHEWVKRQYPRKLEAIVKQALERHFPLSLPSERHNRIWQDVIMELIELGLICTQNNPSRRPSMLDVAQELGRLKDYLSNPSHHMTEEVNCKGDILSTVKA 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2456g00014 977 CDD STKc_IRAK 661 950 - -
Pral2456g00014 977 Gene3D Ribonuclease Inhibitor 190 259 IPR032675 -
Pral2456g00014 977 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Pral2456g00014 977 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Pral2456g00014 977 Gene3D Transferase(Phosphotransferase) domain 1 732 973 - -
Pral2456g00014 977 ProSiteProfiles Protein kinase domain profile. 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2456g00014 977 FunFam Nuclear pore complex protein NUP107 24 184 - -
Pral2456g00014 977 Pfam Leucine Rich repeat 417 432 IPR001611 GO:0005515
Pral2456g00014 977 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pral2456g00014 977 SUPERFAMILY Protein kinase-like (PK-like) 637 947 IPR011009 -
Pral2456g00014 977 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 960 - -
Pral2456g00014 977 SMART serkin_6 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2456g00014 977 SMART LRR_typ_2 272 296 IPR003591 -
Pral2456g00014 977 SMART LRR_typ_2 140 164 IPR003591 -
Pral2456g00014 977 SMART LRR_typ_2 321 345 IPR003591 -
Pral2456g00014 977 SMART LRR_typ_2 92 116 IPR003591 -
Pral2456g00014 977 SMART LRR_typ_2 369 392 IPR003591 -
Pral2456g00014 977 SMART LRR_typ_2 393 417 IPR003591 -
Pral2456g00014 977 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Pral2456g00014 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Pral2456g00014 977 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 266 359 - -
Pral2456g00014 977 ProSiteProfiles Leucine-rich repeat profile. 419 440 IPR001611 GO:0005515
Pral2456g00014 977 PANTHER RECEPTOR-LIKE PROTEIN 55 300 949 - -
Pral2456g00014 977 SUPERFAMILY L domain-like 30 256 - -
Pral2456g00014 977 Gene3D Phosphorylase Kinase; domain 1 626 730 - -
Pral2456g00014 977 SMART LRR_sd22_2 393 408 - -
Pral2456g00014 977 SMART LRR_sd22_2 272 298 - -
Pral2456g00014 977 SMART LRR_sd22_2 140 167 - -
Pral2456g00014 977 SMART LRR_sd22_2 417 438 - -
Pral2456g00014 977 SMART LRR_sd22_2 116 137 - -
Pral2456g00014 977 Pfam Leucine Rich Repeat 493 512 IPR001611 GO:0005515
Pral2456g00014 977 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Pral2456g00014 977 ProSiteProfiles Leucine-rich repeat profile. 323 345 IPR001611 GO:0005515
Pral2456g00014 977 PRINTS Leucine-rich repeat signature 321 334 - -
Pral2456g00014 977 PRINTS Leucine-rich repeat signature 169 182 - -
Pral2456g00014 977 Pfam Protein kinase domain 657 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2456g00014 977 SUPERFAMILY L domain-like 326 577 - -
Pral2456g00014 977 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 360 589 - -
Pral2456g00014 977 Gene3D Ribonuclease Inhibitor 260 594 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2456g00014 Pral-Chr2456 73675 77135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2456g00014 24 952 Receptor kinase-like Gene Family AT3G47110 35.798 4.09e-156 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral2456g00014 Pkinase 6.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2456g00014 - - qsa:O6P43_022222 1331.24