Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2455g00017 ATGAAGCGGGCAAGGAAATCGAAGAGGGTTTCGTGGGCTCCTGGATTTAATCTGTGTCAGGTGAAGTTGTTCTTATCTGAGGACTGCCCTTCGAAAGTTAGCCAGACATCTCAAGATCTTCTTCAAGCAAAGACATCATCTATTTTGCATTCAAGCACTAATGAATCTCATGATTTGCCTCCTGGCTTTGAAGACAATCATATTTCGAACCATCTAAGGAATGAACTCTCCCACTTATATCAGATTAAATGGAAAACTCCTCCCCTGTTTGCCCTCTGTCAAAATTGGCTGGTTGCGGCTGGTGAAGAAAGTAGGGAGAAAGTGGATCAAAAGCTGAGAGAAATGAAGGTGCTTGAAGCAGTATATCCTCGCCCTTCAGCTATTCCTCCAAGTCCCTCTGTTTCTTTAGATGTAGAGGAGGAAGACTACGATGATAACCTCACTCCTCTTATCCCTATCGTTCCTATTGAGGAAGAAGAGCTTATGGATGTTAAACCTGAATTGCCAGCGACAATTGACACCTCCGCCACTCTTCAGACACAAAGTTTGCACCATTCCATATCAGCAACAGATAGACCCATATGTTCACAGCTTAGTACCTCATCCACTCTAGCCTCACCTGGGACATCTGGTGTGGAAGCAGATGTTGCAGCAGCTTCTGCTGTTGTTGCTGCCATCATGAATAGTAATGAGCAAGGCAGCTCAATTGACATGGATCTACTTGTTAAAATACTTAATGATCCGTTGTTGATTGAGAAGTTGAGAAGTGTTCATGATGGAGCTGCTGCAACCACTGCAAGTGCATCCGCAAATTTAGTGGGTTTACCTATTTCTGGAGTTAAGTGCACTTCTCCATCAGTTTCATCATTTCCGCTTACACCTGATAAGCCAACTTCTGGGGTTAGTCCCTCAAATATTGTGGGTTTATTTCCTGATTCTGGCTTGATGCCAGTCACTCCTTCAGTTCAATTGATGCATACAGTTGATAAGCCAGGAACCGCGACACTTCCATTTTCTAGGCCTGTGCCGGGGAAACTAGGAACTCCTTCAGCTCCATTGCCTTCGCATACAATTGCTGCTGATATTCACAAGCCTGTGAACAAAACCACTGACCATTGGTCAAGTGGGGGCCTGCCTTCTGTAAGTACCCAACGTTCTCAACAAGATACAGTTAAGCAAGCAGCACCCATGGCTTCCATTTCATCCAGAGAGCCGAGCACGGTGCCATTATCTTCAACAGGTGTGAGCATGCCTGCAGTAGTAAACCAGGTGCGATCCCCTACAACTACAATGGCTTACCGACCCAGTACAGGCCCAGCATTTGCTGGGAAGGAAGCTCATCCTGTGAAGGATCTCAGCTATTATAAGAACCTTATTCGGCAACATGGTGCTGATGATAATAATAGTAGGCAAGAGACGCATGACTCCCAAATAGCTATCCGTCAAACTAATTTCAAAGATTTGAAACCGGTTCATAACAATAAACCAGGAGAAGGGAATTACAAAACCCAGAAACCTTGCATATACTTCAAAAGTTCAAGGGGTTGTCGAAATGGTTCCAATTGTCCTTATCAACATGACGTGTCAGCTCAATGGGGTTCTGTTGACATTCTAGGCTCCAAAAATGCAAAAAGAGCTAAATTAGGACCAGAAATCCGGGGCAGAGTATTAATTTAG 1677 0.4436 MKRARKSKRVSWAPGFNLCQVKLFLSEDCPSKVSQTSQDLLQAKTSSILHSSTNESHDLPPGFEDNHISNHLRNELSHLYQIKWKTPPLFALCQNWLVAAGEESREKVDQKLREMKVLEAVYPRPSAIPPSPSVSLDVEEEDYDDNLTPLIPIVPIEEEELMDVKPELPATIDTSATLQTQSLHHSISATDRPICSQLSTSSTLASPGTSGVEADVAAASAVVAAIMNSNEQGSSIDMDLLVKILNDPLLIEKLRSVHDGAAATTASASANLVGLPISGVKCTSPSVSSFPLTPDKPTSGVSPSNIVGLFPDSGLMPVTPSVQLMHTVDKPGTATLPFSRPVPGKLGTPSAPLPSHTIAADIHKPVNKTTDHWSSGGLPSVSTQRSQQDTVKQAAPMASISSREPSTVPLSSTGVSMPAVVNQVRSPTTTMAYRPSTGPAFAGKEAHPVKDLSYYKNLIRQHGADDNNSRQETHDSQIAIRQTNFKDLKPVHNNKPGEGNYKTQKPCIYFKSSRGCRNGSNCPYQHDVSAQWGSVDILGSKNAKRAKLGPEIRGRVLI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2455g00017 558 ProSiteProfiles Zinc finger C3H1-type profile. 501 529 IPR000571 GO:0046872
Pral2455g00017 558 MobiDBLite consensus disorder prediction 369 414 - -
Pral2455g00017 558 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2455g00017 Pral-Chr2455 63727 69485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2455g00017 81 163 Homeobox Transcription Factor Family AT4G02560 40.964 6.83e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral2455g00017 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2455g00017 - - gmx:102661587 526.554