Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2455g00012 ATGGCCATCAAAAAATCCAACAAGCTACCACAGGCGGTTGTACTAAAGCAAATCCTTAAGAGATGCTCAAGTTTTGGGAAGAAACAGGGGTACCATGAAGTGGGTCTTCCTGTTGATGTTCCTAAGGGCCATTTTGCTGTCTATGTTGGGGAAAACAGAACCAGCTGTCTAGTTCCCCCACCCTTTTGCCTTCGCGTTCGTTCAAGGAGAGACGCCATGGGGCGGGTCATCCGTGCTCAGAGGAAGGGTGCTGGTTCCGTTTTCAAGTCTCACACGCACCACCGCAAGGGTGCTGCGAGGTTCAGAAGCCTCGACTTCGGCGAGCGAAATGGGTATCTGAAAGGTGTGGTCACCGATGTCATTCACGACCCTGGTCGTGGAGCTCCTCTCGCCAAGGTTACATTCCGCCACCCCTTCAGGTATAAGAAGCAGACGGAGCTCTTTGTTGCTGCGGAGGGTATGTACACTGGCCAGTTCGTTTACTGCGGCAAGAAAGCCTCCCTTGTCGTTGGTAACGTGTTGCCGATCAGATCCATCCCCGAAGGAGCTGTTATTTGCAACGTCGAGCACCACGTCGGTGACCGCGGCGTGTTTGCTAGGTGTTCTGGCGATTATGCCATTGTTATCAGCCACAACCCAGATAATGACACTTCTAGGATCAAGCTTCCATCTGGTGCAAAGAAGATTGTTCCCAGTGGCTGCCGTGCCATGATTGGGCAGGTGGCAGGCGGAGGGAGAACAGAAAAGCCCCTTCTTAAAGCCGGTAATGCTTACCACAAGTTCAGGGTGAAGAGAAATTGCTGGCCTAAGGTTCGTGGTGTGGCTATGAACCCCGTGGAGCATCCTCATGGAGGAGGTAATCACCAACACATTGGTCATGCAAGTACTGTCAGGCGTGATGCTCCTCCTGGCCAGAAGGTCGGTCTCATTGCTGCCAAGAGAACCGGTCGTCTTAGGGGGCAAGCTGCCGCAACTGCTGCTAAAGCTGATAAAAGCGCTTGA 1002 0.5289 MAIKKSNKLPQAVVLKQILKRCSSFGKKQGYHEVGLPVDVPKGHFAVYVGENRTSCLVPPPFCLRVRSRRDAMGRVIRAQRKGAGSVFKSHTHHRKGAARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTFRHPFRYKKQTELFVAAEGMYTGQFVYCGKKASLVVGNVLPIRSIPEGAVICNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAATAAKADKSA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2455g00012 333 MobiDBLite consensus disorder prediction 282 333 - -
Pral2455g00012 333 SUPERFAMILY Nucleic acid-binding proteins 73 169 IPR012340 -
Pral2455g00012 333 Pfam Ribosomal Proteins L2, RNA binding domain 85 162 IPR022666 GO:0003735|GO:0005840|GO:0006412
Pral2455g00012 333 SMART Ribosomal_L2_C_2 168 303 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pral2455g00012 333 Pfam Ribosomal Proteins L2, C-terminal domain 170 297 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pral2455g00012 333 Coils Coil 331 333 - -
Pral2455g00012 333 Gene3D Ribosomal protein L2, domain 3 242 319 IPR014726 -
Pral2455g00012 333 SMART Ribosomal_L2_2 83 162 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pral2455g00012 333 FunFam 60S ribosomal protein L2 242 319 - -
Pral2455g00012 333 FunFam 60S ribosomal protein L8 162 241 - -
Pral2455g00012 333 ProSitePatterns Ribosomal protein L2 signature. 269 280 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pral2455g00012 333 Gene3D - 162 241 IPR014722 -
Pral2455g00012 333 FunFam 60S ribosomal protein L2 73 158 - -
Pral2455g00012 333 SUPERFAMILY Translation proteins SH3-like domain 171 318 IPR008991 -
Pral2455g00012 333 Gene3D - 73 158 IPR012340 -
Pral2455g00012 333 PANTHER RIBOSOMAL PROTEIN L2 69 327 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2455g00012 Pral-Chr2455 40842 52582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2455g00012 73 330 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 92.248 0.0 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2455g00012 K02938 - mnt:21409345 508.834