Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2455g00004 ATGGGCCCGGCTTTGAGAAACGAGTTGGAATCACGGTCTGTGGCCCAAAACCAAACAAAATCAATCGAGCAATATAAAAATCAGCAAGCAGCAAACGAGGATGCTGGAGGGAGTGGAAGAGGAGGGTATTTGTGCAGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTATGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCTCGTGAACGCCAGAAGAAACGCTTCACCTCCACCTCTGATCATCTCCCCAGTCCCATGCACTTGCAAAGACCTCCTTCTTCCGCTACTACTAATTGGAAGCCTGACCACGAGTCCATTCTTCATCCGAAGTATTCTAACATACCGCCATCTCACGGCGTTTCTTCTGCTTCATCTTCTACTGCTGGGATGGTTTCCCTGGGCCAGATGGGGAACTATGGGTATGGATCTGTGACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGCAGGAAGCAGTGGCACCATAAGCCACAATTTGGGATGGGTAGGTATGGATCCATACTCAAACTACACTAACTTCTTGGACAAAATAAGGCCTGGCGATCAAGAAACGCTGAAAGAAGAACAAGAAGGAGAAGATGGAGCCCCTGAGATTGAAACTCTCCCTCTTTTTCCCATGCACGGTGAGGACGTCCACGGCTACTGCAACCTCAGGTCTGATTCTTCTTACTATGGCGGTGGCTGGTATCACGGCGATGAATATGGCTTCAAGAACAATGGCTCTCATCGTACTTCCCTCGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGATTCAAGTTGA 930 0.486 MGPALRNELESRSVAQNQTKSIEQYKNQQAANEDAGGSGRGGYLCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSTSDHLPSPMHLQRPPSSATTNWKPDHESILHPKYSNIPPSHGVSSASSSTAGMVSLGQMGNYGYGSVTMEKCFRDCSISAAGSSGTISHNLGWVGMDPYSNYTNFLDKIRPGDQETLKEEQEGEDGAPEIETLPLFPMHGEDVHGYCNLRSDSSYYGGGWYHGDEYGFKNNGSHRTSLELTLNSYTRRSPDSS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2455g00004 309 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 29 302 IPR044555 GO:0003700|GO:0099402
Pral2455g00004 309 CDD homeodomain 50 112 IPR001356 GO:0003677
Pral2455g00004 309 MobiDBLite consensus disorder prediction 110 165 - -
Pral2455g00004 309 Pfam Homeodomain 49 110 IPR001356 GO:0003677
Pral2455g00004 309 SUPERFAMILY Homeodomain-like 43 115 IPR009057 -
Pral2455g00004 309 ProSiteProfiles 'Homeobox' domain profile. 45 111 IPR001356 GO:0003677
Pral2455g00004 309 MobiDBLite consensus disorder prediction 117 140 - -
Pral2455g00004 309 MobiDBLite consensus disorder prediction 1 49 - -
Pral2455g00004 309 MobiDBLite consensus disorder prediction 10 34 - -
Pral2455g00004 309 Gene3D - 49 115 - -
Pral2455g00004 309 SMART HOX_1 47 115 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2455g00004 Pral-Chr2455 16260 24571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2455g00004 43 258 Wox Gene Family AT2G17950 44.269 1.61e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral2455g00004 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2455g00004 - - gmx:100775555 380.178