Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2449g00002 ATGGCCAGAGTTTCCACATCTTTATCTCCCAAACGTGGGGAATGGGTGAAGGGGAAATTGATAGGATCAGGATCTTTCGGGACTGTTCATTTAGCCATGAGCAAATCCACAGGAGGACTCTTTGTTGTTAAATCAGCACATACAAGGGCTGAATTAGCAGCTTTAGAGAATGAGGTTGAAATTCTCAAGAATCTAGAACCATCTCCTTATATAGTCCAATACTTGGGGTCAGAAAGACACGGAGATGATCTCAATGTTCTAATGGAGTACATGGCTGGGGGTAGCTTGGCTGATATTGCAGAGAAATTTGGTGGATCATTACAAGAAGATGTGGTTCGTTTGTACACAAAAGAAATCCTTAAAGGCCTCAAGTATCTTCATGGTAATGGGATTGTGCACTGTGACCTTAAGTGCAAAAACGTGCTTCTGGGGTCTTCTGGGGACATCAAATTGGCAGATTTTGGATGTGCAAGGAGGGTGGAGGACTTGAAAAATAAAAGTTTGATGAAGAAGAATACCAAGTCTTTGGAATATGTTAGCGGGACCCCTCTCTGGATGGCTCCTGAAGTTTTGAGGAATGAAGAGCTTGATTTTTCTGCAGATATATGGTCTTTGGGATGCACAGTTATTGAAATGGCTACTGGTAGGCCCCCCTGGGGTGCTTCTAAGCATGATTCAGACCCAATGGCTGTCCTTTTGAAGATTGCCTGTGGTGATGAGATACCTAAGCTCCCAACCCATTGCACAAAGGAGGGTCTGGATTTCTTGAGGAGGTGTTTGGACAGAGACTCAAGAAAAAGGTGGACATGTGAGGAATTACTTAGGCACCCATTTGTATCAAGGGATTCATCTGTAACAACACCACCATCTTCACCCAAAGATGCTGCTTCCTCACCAGTCAGTGTGTTGGGGATCTCAAGTTTTGATGATGCTTATGATTTGGAAGAACCAGAAAGTCCAGAGGGAAATGATCTCTCAGTCATAAAGCCATTTACACTTTGTAAGGATGGGAGAACAATGCCAAGGCATGGAGATGAATGTGCATTATGTTCATCACAGAATTGGATTACTGTCAGATCATGA 1083 0.4331 MARVSTSLSPKRGEWVKGKLIGSGSFGTVHLAMSKSTGGLFVVKSAHTRAELAALENEVEILKNLEPSPYIVQYLGSERHGDDLNVLMEYMAGGSLADIAEKFGGSLQEDVVRLYTKEILKGLKYLHGNGIVHCDLKCKNVLLGSSGDIKLADFGCARRVEDLKNKSLMKKNTKSLEYVSGTPLWMAPEVLRNEELDFSADIWSLGCTVIEMATGRPPWGASKHDSDPMAVLLKIACGDEIPKLPTHCTKEGLDFLRRCLDRDSRKRWTCEELLRHPFVSRDSSVTTPPSSPKDAASSPVSVLGISSFDDAYDLEEPESPEGNDLSVIKPFTLCKDGRTMPRHGDECALCSSQNWITVRS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2449g00002 360 Coils Coil 45 65 - -
Pral2449g00002 360 SMART serkin_6 15 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2449g00002 360 SUPERFAMILY Protein kinase-like (PK-like) 13 317 IPR011009 -
Pral2449g00002 360 CDD STKc_MAPKKK 14 279 - -
Pral2449g00002 360 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 14 296 - -
Pral2449g00002 360 ProSiteProfiles Protein kinase domain profile. 15 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2449g00002 360 MobiDBLite consensus disorder prediction 281 300 - -
Pral2449g00002 360 Pfam Protein kinase domain 16 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2449g00002 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Pral2449g00002 360 Gene3D Transferase(Phosphotransferase) domain 1 10 312 - -
Pral2449g00002 360 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2449g00002 Pral-Chr2449 18678 19870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2449g00002 4 359 MAP Kinase Kinase Kinase AT5G55090 41.351 1.15e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral2449g00002 Pkinase 7.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2449g00002 K20716 - pcin:129306931 630.557