Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2448g00005 ATGGCTCACCCCAAAGCCTCTCATGGGCTTCTCCTCCTCCTCAGCTTCTTCCTCCTAACCCTTTGCTCTGTTCCATCTTTGGCCGATGACCCTCAGGTTCTGATCGAGTTCAAGAGCTTCTTGTCTAATGCCGATGCCTTGTCCAACTGGAACCAATCTATCAGTGTCTGTAACTGGAAAGGTATAAAATGTCGCAAAGGTGGATTTCACTTGATACTGGAGAAGATGGGACTGAGTGGCACTATAGATATTAATACCCTGTTGGGATTGTCCAATTTGCAGTCTTTTAGCGTCAAGAACAACAATTTTGAAGGTAAAATGCCTAGCTTTAACAGGTTTGGGAGATTGAAGGGACTGTATTTGTCCCATAACAAGTTCTCTGGAGACATCCCTGATAATGCTTTTGAGGGTATGAAATATCTGAGCAAGGTATTCTTGGATGAAAATGAGTTCACCGGTCGCATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATTTGGACTTACATTCGAATCACTTTGAGGGAAACATTCCAGAGTTTCGAACCAAAAATAAGTTCAGAGTTTTCAATGTATCCAACAACCAGCTCGAAGGTGAAACACCAGGAAGCACAAACGTTGGCGATCCCAGCGCAAATGATGTAATTTGCGGTGCAATAGGAAACGAATTGTGTGGAAAACCTTTGAGTCCCTGCAAAAAGTCCTCCTCAAGGAAGCGAGATATTCTTATAATTGCTATTATAGTGGTGGCTGTCATTCTCTTGGCTTCAATTATAGCAGCTTTAATTGTTCGTCGTCGCCGGAGGCGAAGAAGACGTAGTTCTCAGACGCAAACTACGGTTCAGCAAGTGCAGCATCAAAACAGTGCGCCATTGGTAATTAAGAAGAGTCCATCACTTGATCTGACAGTTGAATTCAAGAAGGGCGAGGGTGGGGATTTGAACTTTCTTAAGAAAGACAACGAGAGATTTGATCTGCAAGATCTTCTTAGAGCCTCGGCTGAAATTCTGGGCAGTGGAAGTTTTGGATCTACGTATAAGGCTATTGTTTTGAACGGACCAGCCGTGGTCGTGAAGAGATTTAAGCACATGAACAATCTTGGGAAACAAGAGTTCTTTGAGCACATGAGAAGGCTCGGAAGCCTAAGCCATCCTAACCTTCTTCCCCTGGTCGCTTTCCACTACAGAAGAGAAGAAAAGCTTCTGGTTTATGACTTGGTTGAAAATGGCAGCTTGGCCAGTCATCTCCATGGTAGGCGTGGTTCTGGGCTAGACTGGTCAACCCGATTGAAAATCATAAAAGGAGTAGCGAGAGGATTAGCTTACCTCTACAGAGAATTCCCAGATGAAAAGCTACCACATGGACATCTCAAATCCTCGAATGTTCTGCTAGACTGCTCAATGGAGCCTCGTTTGACGGAGTACGGACTCGTGCCGGTGATGAACAAGAGCCACGCTCAACGGTTCATGGCAGCATACAAGGCCCCAGAGATGAACCAATCGGAGCGACCCAGCCAGAAGACGGACCTGTGGTGTTTGGGGATTCTCATTCTGGAACTACTGACAGGGAAATTCCCGGCAAATTACCTACGACATGGGCAAGGAGCGAACTCGGACTTGGCCACGTGGGTGAACTCGGTGGTGAGAGAAGAGTGGACAGGGGAGGTGTTCGATAAGGATATTCTGGGTACGAGGAATGGTGAAGGAGAGATGCTGAAGCTGTTGAAGATAGGAATCTACTGTTGTGAATGGGACGTGGAGAATCGGTGGGATTGGAAGCAGGCGATAGCCAAGATTGAGGAATTGAAGGAGAAGGACAGTGAAGACGATTTCTCTTCTTTTAATAACAGCGAAGCAGATTTGTCCTCCTCCAGGCCTATCACCGACGAGGATTAA 1899 0.4602 MAHPKASHGLLLLLSFFLLTLCSVPSLADDPQVLIEFKSFLSNADALSNWNQSISVCNWKGIKCRKGGFHLILEKMGLSGTIDINTLLGLSNLQSFSVKNNNFEGKMPSFNRFGRLKGLYLSHNKFSGDIPDNAFEGMKYLSKVFLDENEFTGRIPSSLAELPNLLDLDLHSNHFEGNIPEFRTKNKFRVFNVSNNQLEGETPGSTNVGDPSANDVICGAIGNELCGKPLSPCKKSSSRKRDILIIAIIVVAVILLASIIAALIVRRRRRRRRRSSQTQTTVQQVQHQNSAPLVIKKSPSLDLTVEFKKGEGGDLNFLKKDNERFDLQDLLRASAEILGSGSFGSTYKAIVLNGPAVVVKRFKHMNNLGKQEFFEHMRRLGSLSHPNLLPLVAFHYRREEKLLVYDLVENGSLASHLHGRRGSGLDWSTRLKIIKGVARGLAYLYREFPDEKLPHGHLKSSNVLLDCSMEPRLTEYGLVPVMNKSHAQRFMAAYKAPEMNQSERPSQKTDLWCLGILILELLTGKFPANYLRHGQGANSDLATWVNSVVREEWTGEVFDKDILGTRNGEGEMLKLLKIGIYCCEWDVENRWDWKQAIAKIEELKEKDSEDDFSSFNNSEADLSSSRPITDED 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2448g00005 632 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2448g00005 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 609 IPR046959 -
Pral2448g00005 632 Gene3D Ribonuclease Inhibitor 22 71 IPR032675 -
Pral2448g00005 632 FunFam Pollen receptor-like kinase 1 408 614 - -
Pral2448g00005 632 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Pral2448g00005 632 Gene3D Transferase(Phosphotransferase) domain 1 408 625 - -
Pral2448g00005 632 Gene3D Phosphorylase Kinase; domain 1 301 407 - -
Pral2448g00005 632 ProSiteProfiles Protein kinase domain profile. 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2448g00005 632 MobiDBLite consensus disorder prediction 604 632 - -
Pral2448g00005 632 SUPERFAMILY Protein kinase-like (PK-like) 336 601 IPR011009 -
Pral2448g00005 632 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 179 - -
Pral2448g00005 632 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Pral2448g00005 632 SUPERFAMILY L domain-like 28 205 - -
Pral2448g00005 632 FunFam pollen receptor-like kinase 1 303 407 - -
Pral2448g00005 632 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Pral2448g00005 632 Gene3D Ribonuclease Inhibitor 72 242 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2448g00005 Pral-Chr2448 13536 16142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2448g00005 12 631 Receptor kinase-like Gene Family AT4G31250 45.401 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral2448g00005 Pkinase 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2448g00005 - - tpra:123893577 692.189