Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2445g00004 ATGGCGCGTGATGCTGATGGAGTTGGGTGCTCTTCAAGTTCTTCTGGTTCAACTAGGAGAAGGAAGTATCATGTGTTTTTGAGCTTTCGAGGGGAAGATACTCGGAAAAATTTTTCTGATCATTTGTATGCCGCTTTAAAACGCAAAGGATTAAAAACTTTCAGGGATGAAGAAGAACTTGAAAGGGGAGAATCTATTAATCCAAGTTTAGTACAAGCAATTGAAGAGTCTCGTTCTGCAATTGTTGTGCTCTCCCCAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTCAAAAGATCCTGCAGTTAAAGGAAGAGACGAGTTTTCAAGTATTTCCGATATTTTATAGTGTAGATCCTTCTGATGTTAGGAAACAAAAGGGAAGTTTTGCAGAAGCATTCAAAAAGCATGAAGAAAGATTTACCGAAAACAAAAGAAAGGTACAAAAGTGGAGAGATGCTTTAGAAAAAGTTGCTACTTTATCTGGCTGGGACTCAAAAGATCGGTATGAAACAGAATTCATTGAAAGCATTGCTGAAGAAATGGGGTCAAAGTTACTTGATAAATCAGCATCTGGTCATGGCAAGTTAATTGGAATTGAACCAAAATTAGATGAATTGAAGTCAATTGTAGCAAGGGAATCAAAAGGAATTGGGTTTATAGGAATATGGGGCACAGGAGGCGTAGGCAAAACAACTCTTGCTAGAGCCTTTTATGAGCGGAAGCAAGAGCGCAAAAACTTTGAGATTCACTGCTTCCTTGATAATATTAGAGAGGCATGGGAAAAAGAAGGATGGTTCAGTGAAGGGAGCATAATAATAATAACAACTAGGGACAGGCATTTGTTATCATCACATGGTGTATCTGCTGTGTATGAATTCAAATTATTGAGTGATAACGAGTCCCTTGAACTTTTCCTTGAAAAAGCTTTTAAAGAAGAGCATCCTAATGAAGATTATTTGAAACTTGCTAGAACTGTCATTAAGTATGCTGGAGGCCTTCCTTTAGTGCTCACAGTGTTAGGTTCATCTCTTTGCAAAAGAACTATAGTGGAATGGAAAGATGAACTAGCTAAGTTCAAGAAAGTTCCTCCAAAGGACATTTTGAAGATACTTCAAGTGAGTTTTGATGGACTGGATGATCAGGAAAAAACCATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGACAAAGATCATGTCATACAAATTTTAGAAACTTTGGAGAAGGATCTTCACCCAGAAACTGGGATAAATGTTCTCATTAAGAGATCACTAATAACTAATTATGAAGGGCATTTGTGGGTGCATGAAATTCTCCAAGATATGGGAAAATATATTGTTTATCAAGAATCACCTTATGACGCCGGCAAGCGTTCAAGGATATTGTCTTTGGAGGATGCCAATCATGTACTAAAAAGAAATAAGGGGACAGAAGCAACTCGAGGAATGGCCCTAACATTGGAAAAGTCATGTGATGCATTTTGGGATCCTGAAGCCTTCTCAAAGATGAGTAATCTCAGGTTACTTATCATTTCAAGTCGCTCACATGTTTCACATTGCCAATTAAATCTTCCGCATGGGCTCAAGACCCTTTCCAGCGAGTTGAAAGTCATAGAATGGGTGGGGTATCCATTATTTTATTTGCCTAGTCAGCCTCAACTCCATGAACTTTCTCTTGGGCAACACAAGAAACTTGTCATTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACCCTTCCAGAAAAATTTGAGATGAATGGTTTGGAGACTTTTATTCTATCGGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGACATGTCTATCGAAGCTTGATTTAGAGAAGACTGGTATAGCCAAACTACCCTCAATCACTGGGCAATTTGATTGGCCTCGTTGA 1920 0.3812 MARDADGVGCSSSSSGSTRRRKYHVFLSFRGEDTRKNFSDHLYAALKRKGLKTFRDEEELERGESINPSLVQAIEESRSAIVVLSPNYASSTWCLDELQKILQLKEETSFQVFPIFYSVDPSDVRKQKGSFAEAFKKHEERFTENKRKVQKWRDALEKVATLSGWDSKDRYETEFIESIAEEMGSKLLDKSASGHGKLIGIEPKLDELKSIVARESKGIGFIGIWGTGGVGKTTLARAFYERKQERKNFEIHCFLDNIREAWEKEGWFSEGSIIIITTRDRHLLSSHGVSAVYEFKLLSDNESLELFLEKAFKEEHPNEDYLKLARTVIKYAGGLPLVLTVLGSSLCKRTIVEWKDELAKFKKVPPKDILKILQVSFDGLDDQEKTIFLDIACFFNGMDKDHVIQILETLEKDLHPETGINVLIKRSLITNYEGHLWVHEILQDMGKYIVYQESPYDAGKRSRILSLEDANHVLKRNKGTEATRGMALTLEKSCDAFWDPEAFSKMSNLRLLIISSRSHVSHCQLNLPHGLKTLSSELKVIEWVGYPLFYLPSQPQLHELSLGQHKKLVIVDLKDCKEVKTLPEKFEMNGLETFILSGCSKVRKLPEFGKDMTCLSKLDLEKTGIAKLPSITGQFDWPR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2445g00004 639 PRINTS Disease resistance protein signature 221 236 - -
Pral2445g00004 639 PRINTS Disease resistance protein signature 524 538 - -
Pral2445g00004 639 Gene3D Ribonuclease Inhibitor 464 636 IPR032675 -
Pral2445g00004 639 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Pral2445g00004 639 Gene3D - 297 381 IPR042197 -
Pral2445g00004 639 SUPERFAMILY RNI-like 496 630 - -
Pral2445g00004 639 Pfam TIR domain 22 193 IPR000157 GO:0007165
Pral2445g00004 639 SMART till_3 22 162 IPR000157 GO:0007165
Pral2445g00004 639 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 262 IPR044974 GO:0006952
Pral2445g00004 639 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Pral2445g00004 639 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 165 IPR035897 -
Pral2445g00004 639 Pfam NB-ARC domain 262 364 IPR002182 GO:0043531
Pral2445g00004 639 Gene3D - 15 190 IPR035897 -
Pral2445g00004 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 391 IPR027417 -
Pral2445g00004 639 Gene3D - 191 265 IPR027417 -
Pral2445g00004 639 SUPERFAMILY "Winged helix" DNA-binding domain 368 475 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2445g00004 Pral-Chr2445 95573 100854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2445g00004 555 630 WRKY Transcription Factor Family AT4G12020 34.831 2.98e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2445g00004 - - pcin:129318967 715.687