Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2445g00003 ATGGCGCGTGATGCTGATGGAGTTGGCTGTTCTTCAAGATCTTCTGGTTCAACTAAGAGAAGGAAGTATGATGTGTTTTTGAGCTTTCGAGGGGAAGATACCTGGAAAAATTTTACTAATCATTTGTATGCTGCTTTAAAAAACGAAGGATTAAGAACTTTTCGGGATGAGGAAGGACTTGAAAGGGGAGAATCTATTAATCCAAGTTTAGTAGAAGCAATTGAAGAATCTCGTTTTGCAATTATTGTGCTTTCTCCAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTCAAAAGATCCTGCAATTAAAGGAAGAGACAAGTCTTCAAGTATTTCCGATTTTTTACGGTGTACATCCTTCTGATGTTAGGAAACAAAACGGAAGTTTTGCAGAAGCCTTCATAAGGCATGAAGAAAGATTTGTCAAAGACAAAACGCAGGAATGGAGGGATGCTTTAGAAAAAGTTGCTACTTTATCTGGTTGGGACTCAAAAAACCGGTATGAAACAGAATTCATTGAAAGCATTGCTGATGAAATCGGGTCAAAGTTACTTGATAAATCAGCATCTGATCTTGGCAAGTTAATTGGAATTGAACCAAAATTAGATGAACTGAATTCAATCATAGCAAGGGAATCAGAAGAAGTTGGGTTTATAGGAATATGGGGTGCAGGAGGCGTAGGCAAAACAACTCTTGCTAGAGCCTTTTATGAGCGAGAGCAAAAGCGAAAGAGCAAAAACTTTGAGATTCACTGCTTCCTTGATAATATTAGAGAGACATGTGAAAAACATGGTTTGATTTCGTTGCAAAGAAAACTTCTTTTATCTTTGTACAAAAGGAGTATAGAAGTGGCTGATTTTTATGAAGCAATGGAGTTAATAAAAAGGAAGTTAACCGACAGAGAAATTCTACTTGTCCTTGATGATGTGAGTCATGTTAGCCAACTTGAGAAGCTGGCTCCAAGGCAAGGATGGTTCAGCAAAGGGAGCATAATAGTGATAACAACAAGGGATAAGCATTTGCTATCATCATATCGTGTATCTGATAGTGCTATATATCACATTGAACTCTTGAGTGATAGCGAGTCCCTTAAACTTTTCATTCAAAATGCTTTTAAAGAAGGGCAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATACTGGAGGCCTTCCTTTAGCACTCGAAGTGTTAGGTTCATTTCTTTGCAAAAGAACGATAGAGGAATGGGAAGATGCACTAGCTAAGTTCGAGAAAGGTCTTCCAGAGGACATTTCCAAGATACTTGAAGTGAGTCTTCACGGATTAGAGCTTAATGAGAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGACGAAGATCATATCATACAAATTTTAGAAACATTGGATAAGGATCTTCACCCAAAAATTGGAATAAGGCTTCTTATTGACAAATCACTAGTAATTAATTATAAAGGGCGTTTGTGGGTGCATGAAATTCTACAAAATATGGCTAAACATGTTGTCCATCAAGAATCATCTGGTGATGCCAGCAAGCTTTCTAGGATATTGTCCTTGGATGATGCCAATCATGTATTAGGAGGAAATAAGGTGACATTTGAAAAATACCTCATCAAAACCCCAAATTTTGATGGAATTCCTCATCTTGAAAAGTTGATTCTTCAAGGGTGTTCTAACTTGGTTAAAATTCACCAGTCTCTTGGGCAACACAAGAAACTTGTCACTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACGCTTCCAGAAAAATTTGAGATGAATAGCTTGGAGACTTTTATTCTATCAGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGGCATGTCTATCGAAGCTTGATTTAGAGAAGACTGCTCTAGCCAAGCTACCTCAATCACTGGGCAATTTGATTGGTCTCGTTGAATTAAATTTGACAAACTGCAAAAAGCTGGTCTGTCTTCCATGTAGTGTTGGTAAGTTGAAAGCTCTCAAAATTACCAAACTTTCTAATTGCTCAAACCTTTCAGGCCTGCCAGAGAATTTGAATGAAAATGAAGCCTTGAAAGAGCTGGATTTGAGTGGAATTGCTATAAAAGAGTTATCATTTAGTGGCTACAATGGTGAAGCACAATCTTCATCAACATGGAGTTGCTTATCCCTTCTTTAA 2205 0.3719 MARDADGVGCSSRSSGSTKRRKYDVFLSFRGEDTWKNFTNHLYAALKNEGLRTFRDEEGLERGESINPSLVEAIEESRFAIIVLSPNYASSTWCLDELQKILQLKEETSLQVFPIFYGVHPSDVRKQNGSFAEAFIRHEERFVKDKTQEWRDALEKVATLSGWDSKNRYETEFIESIADEIGSKLLDKSASDLGKLIGIEPKLDELNSIIARESEEVGFIGIWGAGGVGKTTLARAFYEREQKRKSKNFEIHCFLDNIRETCEKHGLISLQRKLLLSLYKRSIEVADFYEAMELIKRKLTDREILLVLDDVSHVSQLEKLAPRQGWFSKGSIIVITTRDKHLLSSYRVSDSAIYHIELLSDSESLKLFIQNAFKEGQPNEDYLNLARTVIEYTGGLPLALEVLGSFLCKRTIEEWEDALAKFEKGLPEDISKILEVSLHGLELNEKTIFLDIACFFNGMDEDHIIQILETLDKDLHPKIGIRLLIDKSLVINYKGRLWVHEILQNMAKHVVHQESSGDASKLSRILSLDDANHVLGGNKVTFEKYLIKTPNFDGIPHLEKLILQGCSNLVKIHQSLGQHKKLVTVDLKDCKEVKTLPEKFEMNSLETFILSGCSKVRKLPEFGKDMACLSKLDLEKTALAKLPQSLGNLIGLVELNLTNCKKLVCLPCSVGKLKALKITKLSNCSNLSGLPENLNENEALKELDLSGIAIKELSFSGYNGEAQSSSTWSCLSLL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2445g00003 734 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
Pral2445g00003 734 Pfam NB-ARC domain 213 433 IPR002182 GO:0043531
Pral2445g00003 734 Pfam TIR domain 22 189 IPR000157 GO:0007165
Pral2445g00003 734 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 535 IPR044974 GO:0006952
Pral2445g00003 734 ProSiteProfiles TIR domain profile. 21 185 IPR000157 GO:0007165
Pral2445g00003 734 Gene3D Ribonuclease Inhibitor 508 732 IPR032675 -
Pral2445g00003 734 PRINTS Disease resistance protein signature 393 407 - -
Pral2445g00003 734 PRINTS Disease resistance protein signature 298 312 - -
Pral2445g00003 734 PRINTS Disease resistance protein signature 219 234 - -
Pral2445g00003 734 PRINTS Disease resistance protein signature 671 687 - -
Pral2445g00003 734 Gene3D - 19 187 IPR035897 -
Pral2445g00003 734 SMART till_3 22 160 IPR000157 GO:0007165
Pral2445g00003 734 SUPERFAMILY L domain-like 549 713 - -
Pral2445g00003 734 SUPERFAMILY "Winged helix" DNA-binding domain 429 533 IPR036390 -
Pral2445g00003 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 452 IPR027417 -
Pral2445g00003 734 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 187 - -
Pral2445g00003 734 Gene3D - 358 442 IPR042197 -
Pral2445g00003 734 Gene3D - 188 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2445g00003 Pral-Chr2445 44866 55144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2445g00003 21 716 WRKY Transcription Factor Family AT4G12020 26.755 8.93e-54 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2445g00003 - - pcin:129318967 676.011