Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2442g00004 ATGACGGGAAAATACTATGACATTGATGACATCATCACAGAGGAAGAGATTGTATCAGTTATATTCCAAAAGGCGGCATCAGGGGTGGGAATAGATCCCAGTTCTGAAACCGACTATATTGAAACGAGTTCCAAAGTGGAGATGCCTTTCTGGCTTGCTTATGAGTTACAGTTGAGACAAGTAGTATCTATCAATGTTCCGTCCTGTTTCGATAAAAAAACAAGACTCGAGATTCAGGCTGATTGTGCGAGTGTGGATCTGAGGTCTCGATGCCCATTCTTTTATGAATTTGGATGCAAGATAGCACCAGTGGTTGGTGATCGGACCATCGGGTTTCTTCTCTTGTCTGCATTTAAGAATAGGTACAAGGAAATCCTCACCAAGGCACATTCCGCAGCAATTTCAGCTGCTTCCAAATTCTGGTCAATTCTGACAAAAGAAGAGATCAATTTGTATAATGCAGCTCAATCCTCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGACCCAGATTTCAGAAAGCCTCTGTTCTTGGAAGAAAGAGGAAATCTACTGAATAG 561 0.426 MTGKYYDIDDIITEEEIVSVIFQKAASGVGIDPSSETDYIETSSKVEMPFWLAYELQLRQVVSINVPSCFDKKTRLEIQADCASVDLRSRCPFFYEFGCKIAPVVGDRTIGFLLLSAFKNRYKEILTKAHSAAISAASKFWSILTKEEINLYNAAQSSMASFKKWRMGGPRFQKASVLGRKRKSTE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2442g00004 186 Gene3D - 1 168 IPR038437 -
Pral2442g00004 186 CDD GINS_B_Psf3 5 67 - -
Pral2442g00004 186 CDD GINS_A_psf3 62 168 - -
Pral2442g00004 186 PANTHER UNCHARACTERIZED 1 185 IPR010492 -
Pral2442g00004 186 Pfam GINS complex protein 46 148 IPR021151 -
Pral2442g00004 186 SUPERFAMILY GINS helical bundle-like 66 167 IPR036224 -
Pral2442g00004 186 SUPERFAMILY PriA/YqbF domain 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2442g00004 Pral-Chr2442 26346 30040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2442g00004 3 185 Core DNA Replication Machinery Family AT3G55490 68.306 7.58e-95 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2442g00004 K10734 - qsa:O6P43_020202 285.804