Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2437g00003 ATGGCTCGCCTACTGCTAAGCATGGATTCAGCCTCATCCCCTCCAGGTAACGGCAACAGAACAGGGGGTTTTAACACAAGTGATGCCAATTTTGACACAAACATGGTGATTATACTAGCGGCCTTGCTCTGTGCATTAATATGTGCTTTAGGGCTAAACTCAATTGTAAGATGTGCTTTGAGATGCAGCAGCAGGTTTGCTTTTGAGACATCAGATGAAGCTGCAGCTCGTGTAGCGGCAAAAGGGTTGAAGAAGAGTGTTTTGCGTCAGATCCCTATAGTTGTATACGGTTCATCAGGTTCTACTGATATTGGAGCCACTGAGTGTCCAATTTGCCTAGGAGAGTTTGTGGATGGAGAGAAAGTGAGGGTTCTTCCAAAGTGCAACCATGGATTCCACGTGAGGTGCATAGACACATGGCTTCTCTCGCATTCTTCTTGCCCTACTTGCAGGCAGTCTTTGCTTGACCAGCATAATGCAAGCACTTCTGGTTCTGGCAATGTATAG 507 0.4635 MARLLLSMDSASSPPGNGNRTGGFNTSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSSRFAFETSDEAAARVAAKGLKKSVLRQIPIVVYGSSGSTDIGATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPTCRQSLLDQHNASTSGSGNV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2437g00003 168 CDD RING-H2_EL5-like 108 151 - -
Pral2437g00003 168 PANTHER RING-H2 FINGER PROTEIN ATL78 24 165 IPR044602 GO:0016567|GO:0016740
Pral2437g00003 168 SMART ring_2 109 150 IPR001841 -
Pral2437g00003 168 FunFam RING-H2 finger protein ATL72-like 74 155 - -
Pral2437g00003 168 Pfam Ring finger domain 108 151 IPR001841 -
Pral2437g00003 168 SMART FANCL_C_2 105 155 - -
Pral2437g00003 168 MobiDBLite consensus disorder prediction 1 23 - -
Pral2437g00003 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 156 IPR013083 -
Pral2437g00003 168 SUPERFAMILY RING/U-box 108 157 - -
Pral2437g00003 168 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2437g00003 Pral-Chr2437 26651 28305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2437g00003 1 158 C3H Transcription Factor Family AT3G10910 60.947 1.27e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2437g00003 - K19040 qsa:O6P43_020103 248.054