Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00021 ATGGCGCTTCAACTTGCAGCACCATCTTCTGGCCTTACCAGCGAAACGAAGTATCGATGTGATGTGTTCCTGAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGTGATTCTCTACAATGCCTTGCGCCGGAAGGGAATCAATGCCTTCATTGATGACAAGAAGCTTGGGAAAGGGAAACGAATATCACCTGCGCTTCTCAAGGCCATCGAAAAATCCAGGATTTCGATCATTGTCTTCTCTAGGAACTACGCTACTTCCTCATGGTGCCTGGATGAACTTGACCACATCATTCAGTGTAAGAAGAAGAAGAACCAGCTGGTTATGCCGATTTTTTATAAGGTGAATCCGATGGATGTACAATATCAGACAAATAGCTTTGGAGAAGCCATGGCTGCCCATGAAAATAGGTTCAGAAATGATCTGGAGAAAGTGCGCAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGTTTGTCATCGGCATGGCTTTTTGAAGATGGAAATGAATCTGGATTTATTGAAAGGATTGTTGAAGATGCATATACTGTGCTACCTCCAAAACGCCTACATAGCACTGGTCACATTGTTGGACTTGAGTCCTGCATAGAAGAAGTGATATCACTTCTAGATCAATCTGATGATGGAGTTTGTATGCTGGGGATTTATGGAACTGGTGGTGTTGGCAAAACAACTCTTGCCAAGGCTTTGTATAATTTAATCTTCCACCAATATGACGGTGCCTGTTTTCTATTTGATGTAACAGACGCTTCAAAGCAGTACCGAGGCATGCTTCATCTCCAACAGACACTTCTATCAGAGATTCTCGACGAAAGGATCAAGTTGGGCAGTGTTGATGAAGGAATATCTAAAATGAAACACAGGCTCTCTCACAAAAGAGTTCTTTTGGTTCTTGATGATGTTGATGAGCTAGAACACCTAGAAAAACTCGCAGGAAGCTCTGATTGGTTTGGTTCTGGAAGCAAGGTCATCATAACCACAAGAAATAAGCAATTACTAATTGCACATCGTGTTGAAACAGCTTATGAAATGAAGAAGCTAAATGATCATGATGCTTTGGAACTCTTTTGTTGGCATGCCTTCCATACGAGCAAACCTCCAAAATGTTATCAAGATATGTCTAGTCGTTTAATAGGTTATGCACAGGGTCTTCCTTTGGCTTTAAGGGTAATAGGTTCCAATTTGGCTCAAAAGAACTTAGAAGAATGGAGAATTACACTTGAACAGTATGAAAGAATTCCAGAAAAAACAGTTCATGAGGTGCTAAAGATAAGCTATGATTGCTTACAGGATACTGCTAAGAGTATTTTCTTAGATATTGCTTGTTTCTTCAAGAATAGTATGGAATATATTGAAGAAATACAAGAAGCTTATAATTATGGGGCAAGGTTTTTTATTGAAGTGCTTGTTGATAAATCTCTTATAACTGTCAGTAATAATGGCCGGTTTTGGATGCATGATCTGATA 1488 0.4026 MALQLAAPSSGLTSETKYRCDVFLSFRGEDTRHSFTVILYNALRRKGINAFIDDKKLGKGKRISPALLKAIEKSRISIIVFSRNYATSSWCLDELDHIIQCKKKKNQLVMPIFYKVNPMDVQYQTNSFGEAMAAHENRFRNDLEKVRKWRSALSEAASLSSAWLFEDGNESGFIERIVEDAYTVLPPKRLHSTGHIVGLESCIEEVISLLDQSDDGVCMLGIYGTGGVGKTTLAKALYNLIFHQYDGACFLFDVTDASKQYRGMLHLQQTLLSEILDERIKLGSVDEGISKMKHRLSHKRVLLVLDDVDELEHLEKLAGSSDWFGSGSKVIITTRNKQLLIAHRVETAYEMKKLNDHDALELFCWHAFHTSKPPKCYQDMSSRLIGYAQGLPLALRVIGSNLAQKNLEEWRITLEQYERIPEKTVHEVLKISYDCLQDTAKSIFLDIACFFKNSMEYIEEIQEAYNYGARFFIEVLVDKSLITVSNNGRFWMHDLI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00021 496 PRINTS Disease resistance protein signature 219 234 - -
Pral2435g00021 496 PRINTS Disease resistance protein signature 295 309 - -
Pral2435g00021 496 PRINTS Disease resistance protein signature 388 402 - -
Pral2435g00021 496 Pfam TIR domain 21 181 IPR000157 GO:0007165
Pral2435g00021 496 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Pral2435g00021 496 Gene3D - 353 437 IPR042197 -
Pral2435g00021 496 Gene3D - 190 348 IPR027417 -
Pral2435g00021 496 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Pral2435g00021 496 Gene3D - 14 189 IPR035897 -
Pral2435g00021 496 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Pral2435g00021 496 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 496 IPR044974 GO:0006952
Pral2435g00021 496 SMART till_3 19 159 IPR000157 GO:0007165
Pral2435g00021 496 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Pral2435g00021 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 447 IPR027417 -
Pral2435g00021 496 Coils Coil 400 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00021 Pral-Chr2435 238781 240767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00021 197 496 WRKY Transcription Factor Family AT5G45050 36.093 5.57e-48 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2435g00021 - - pcin:129286217 728.398