Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00020 ATGGCGATTCTAGTGGAAGCACCATCGTCCTTTAGCTCTCCTACTAAAACCAAGTATGAATACGATGTTTTCCTGAGTTTTAGAGGCGAAGATACTCGCCACACCTTCACTGGGCTTCTCTACGATGCTTTACGACGCAAGGGAATCAACGCCTTCATTGACGACAGGAAGCTTGGAAAGGGGGAAGAGATCTCACCTGCGCTTCTTGAAGCCATTGAGAGATCCAGGATTTCCATTGTTGTGTTCTCTAGGAACTATGCTACTTCCACATGGTGCTTAGAGGAACTCGCCCACATCATTGGGTGTAAGGAGGAGAAGAAGCAGGTGGTTATGCCCGTCTTTTACAAGGTCGATCCGTTAGATGTTCAATATCAGAGAAATAGCTTTGAGAAAGCCATGGCTGCTCTTAAAGATAGGTTCAAAGATGACTTAGACAAAGTGCGCAGATGGAGGTCTGCTTTGTATGAAGCTGCTAGCTTATCATCTGCATGGCTTTTCGATGATGGATGCAAACTTGGGTTTATCGAAAGGATTGTGGAAGATGCATATGCTAGGCTACCACCCAACCCTTTACATAGCGTTGATCACCCAGTTGGACTTAAGTCTCGCATTGAAGAAGTGAAGTCACTTTTGGATCAGTCTCATGATGGCGTTTGTATGTTGGGGATCCATGGAACTGGTGGAATTGGCAAAACAACACTTGCCAAGGCTCTATATAATTCAATATTTTGCCAATTTGAAGGTGCAAGTTTTCTACTTGATGTCAGAGAAGCGTCAAATGAATATCGAGGCATAGTTCGTCTCCAACAATTACTTTTATCTGAGATTCTTGAAGAGAAGAGTAAGAAGTTTGGTAGTGTTGATGAGGGAATAACTAAAATAAAACACAGACTCTCCCACAAAAGAGTTCTATTAGTTCTTGATGATGTTGATGCATTAGAACAATTAGAACAACTTGCAGGAGGGTGTAACTGGTTTGGATCCGGAAGCAAGATCATTATAACGACTAGAGATAAGCAATTATTAAGTGTACATGGTGTTCAAAAAACTTATGAAATGAAGGAGCTAAATGAGCATGAGTCTCTTGAACTCTTCTCTTGGCATGCCTTTCATAACAACCAACCTCCCAAAGGTTATGAAGATATGTCCGGCCGTGTGATTAGTTATGCACAGGGCCTTCCTTTGGCTCTAAGAGTAATAGGCTCCAATTTGACTCAAAAAAGCTTAGAGGAATGGAAGTCAATATTGGAACGATACGATAGGATCCCAGATAAAACAATTCACGAAGTACTAAAGATAAGTTACGACTGCTTACAAGACAATGCTAAGTCTATTTTTCTAGATGTTGCTTGTTTTTTCAAGAAGTGGAGATCGGTATATGCCGATGAAGTACTACACAACTGTCATGGTGGTGCAAGGTTTTATTTTGAGGTGCTCATTGATAAATCATTGGTGAGTGTTGATAAACATGATTGCTTGTGGATGCATGATCTAATACAAGAAATGGGTCGAGAAATTGTCAGACAGGAGGCACCATTAAATCCTGGTGAACGCAGCAGATTGTGGCATCATGAAGATGTTGTTAGAGTATTACGTGAAAATTCTGGAAGCAGCAAAATTGAAGGAATAATGCTTAAATCTCCTCAACAAGAAGAAGTAGCGTGGAGTGGCTTTGCCTTCGAGAAAATGAGCAATCTTAGGATTCTCATTGTGCGAAATGCACTATTTTCAACCGGCCCTAAGCACTTCCCAAATAATTTAAGATTGCTTGATTGGGAGGGATACCCTTCTATGTCCTTACCGGTGGATTTTTACCTTGAGAACATTGTGGTCCTTAGGTTATGTCGTAGTTATGTCAGATTAGTAGAGCCAATCAAGAGGTTAGAATATGTGACAAGCATGGATTTCTCATATTGCGAATTTATAACTGAAGTGCCTAATATGTCTCAAGTCCCAAATTTAAAAGAACTGATATTTGTAGACTGTCGCAATTTGATTAAGGTTCATAATTCTGTGGGATATCTCTCTAAGTTAGCGGTATTAACCGTTAATGGCTGCAGAAAACTTAAAAGCTTTCCTCGTGAAATCAAATTGGCATCTCTTGAACACCTTGACCTTGCTTTTTGTGAGAGTCTTGATTACTTTCCAAATATAGTGGGAAAGATGGACGCATTGAGTACCATTTTTGCAGATAACACTGCCATTGAAGAACTCCCACATTCCATTGGAAATCTCTCAGGGCTTCAAATTTTATCTCTTAACTCCTGCGAAGGTCTTAGGGAGATTCCAGACACAATATTCACGCTGCAAAATCTTGTCTGGCTTTTATTGGAGAATAGCAGACCTCATAGCAGAAAATCCTTGAAGAAGTCAATGCAAGATAGTTATCCAATTATTAGAAGCACAAACTTGAAGATTTTGAATCTAGAAAATTGTTGTCTATTGGATGAAGATCTTCACCTAACTGTGAATTGTTTTCGGAATCTGCAAGAATTAAATCTATCAGGGAATGATATCTTGTCCCTTCCTGACTGCATCAAAGAGTGTGCTTATTTGGAGAAACTAAATCTGGATAACTGCAAGAGGCTAAGAGACATTCCAGAGCTGCCACCAAACCTGGCGGATATACAAGCAGACAATTGCATATCATTAACGAGAGAGTCCTTAAGCCATTTATGGTCCCAGGCTAGAAAGGAGGTGTACTACTTGGCCATCAGTAGTATGCCAGCATCAACATTTCCAGATTGGCTCAACTTTTGCTGCAAAGGAGGGACCTTGTCTTTTCGTGTTCGTGGGAATTTCCCAGTGGTTGCCTTAGTATTTGAGTTTGAGAAAGGAGGTGCGAGCCATGTTTCTGAGGGAAGAGTCCTTGGTCGAATGAGCATCAATGGTCATGAAGTAAAGGAAGGAAATAATATAGCCTTTCCAAGTAGAGAAGGTCATGTGGGTGTATTTGATCTAAGAAGAGCTTTCCCGGACGGAAAACACTGGAAAATCTTAGATGGGTTTCTGGAATTGGATTGGAATGATGTGGAAATAGAAGCCAAATGTGAGCCACCGGATTTGTGCATAGTTAAGTGTGGAGTTTATGTGTACCAGCAGCAAACAGACATGGAGAATGTGCAGTTCAAGTCTTCTTTGCTTTCTTCAAATGATCCAAAATCTTCGTTGAAACGAAGGGCTATAGCTTCTCCTCCTGATGAAAGAACGAAAAAGTTTCGAGTCTATTGA 3231 0.4058 MAILVEAPSSFSSPTKTKYEYDVFLSFRGEDTRHTFTGLLYDALRRKGINAFIDDRKLGKGEEISPALLEAIERSRISIVVFSRNYATSTWCLEELAHIIGCKEEKKQVVMPVFYKVDPLDVQYQRNSFEKAMAALKDRFKDDLDKVRRWRSALYEAASLSSAWLFDDGCKLGFIERIVEDAYARLPPNPLHSVDHPVGLKSRIEEVKSLLDQSHDGVCMLGIHGTGGIGKTTLAKALYNSIFCQFEGASFLLDVREASNEYRGIVRLQQLLLSEILEEKSKKFGSVDEGITKIKHRLSHKRVLLVLDDVDALEQLEQLAGGCNWFGSGSKIIITTRDKQLLSVHGVQKTYEMKELNEHESLELFSWHAFHNNQPPKGYEDMSGRVISYAQGLPLALRVIGSNLTQKSLEEWKSILERYDRIPDKTIHEVLKISYDCLQDNAKSIFLDVACFFKKWRSVYADEVLHNCHGGARFYFEVLIDKSLVSVDKHDCLWMHDLIQEMGREIVRQEAPLNPGERSRLWHHEDVVRVLRENSGSSKIEGIMLKSPQQEEVAWSGFAFEKMSNLRILIVRNALFSTGPKHFPNNLRLLDWEGYPSMSLPVDFYLENIVVLRLCRSYVRLVEPIKRLEYVTSMDFSYCEFITEVPNMSQVPNLKELIFVDCRNLIKVHNSVGYLSKLAVLTVNGCRKLKSFPREIKLASLEHLDLAFCESLDYFPNIVGKMDALSTIFADNTAIEELPHSIGNLSGLQILSLNSCEGLREIPDTIFTLQNLVWLLLENSRPHSRKSLKKSMQDSYPIIRSTNLKILNLENCCLLDEDLHLTVNCFRNLQELNLSGNDILSLPDCIKECAYLEKLNLDNCKRLRDIPELPPNLADIQADNCISLTRESLSHLWSQARKEVYYLAISSMPASTFPDWLNFCCKGGTLSFRVRGNFPVVALVFEFEKGGASHVSEGRVLGRMSINGHEVKEGNNIAFPSREGHVGVFDLRRAFPDGKHWKILDGFLELDWNDVEIEAKCEPPDLCIVKCGVYVYQQQTDMENVQFKSSLLSSNDPKSSLKRRAIASPPDERTKKFRVY 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00020 1076 Gene3D - 189 352 IPR027417 -
Pral2435g00020 1076 Pfam TIR domain 21 162 IPR000157 GO:0007165
Pral2435g00020 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Pral2435g00020 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 448 IPR027417 -
Pral2435g00020 1076 PRINTS Disease resistance protein signature 220 235 - -
Pral2435g00020 1076 PRINTS Disease resistance protein signature 390 404 - -
Pral2435g00020 1076 PRINTS Disease resistance protein signature 297 311 - -
Pral2435g00020 1076 PRINTS Disease resistance protein signature 696 712 - -
Pral2435g00020 1076 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 186 - -
Pral2435g00020 1076 SMART till_3 20 160 IPR000157 GO:0007165
Pral2435g00020 1076 ProSiteProfiles Leucine-rich repeat profile. 828 849 IPR001611 GO:0005515
Pral2435g00020 1076 Gene3D - 15 188 IPR035897 -
Pral2435g00020 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 764 IPR044974 GO:0006952
Pral2435g00020 1076 Gene3D Ribonuclease Inhibitor 726 927 IPR032675 -
Pral2435g00020 1076 Gene3D - 355 439 IPR042197 -
Pral2435g00020 1076 MobiDBLite consensus disorder prediction 1050 1069 - -
Pral2435g00020 1076 Gene3D Ribonuclease Inhibitor 555 725 IPR032675 -
Pral2435g00020 1076 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pral2435g00020 1076 Pfam NB-ARC domain 202 421 IPR002182 GO:0043531
Pral2435g00020 1076 SUPERFAMILY L domain-like 494 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00020 Pral-Chr2435 209115 213929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00020 20 862 WRKY Transcription Factor Family AT4G12020 29.711 1.75e-91 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2435g00020 - - pcin:129284776 1232.24