Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2435g00017 | ATGGCTATTCAAGTTTCATCCCATAGCTTCACCGGCAAACCCAAATACAGATTTGATGTTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCACACCTTCACTGTGCCTCTCTACAATGCTTTGCGCCGTAAGGGAATCAATGCCTTCATTGATGACAAGAGGCTTGGGAAAGGGGAAGAGATCTCACCTACGCTTCTTAGAGCCATTGAGAGATCAAGAATTTCCATTATCGTGTTCTCTAAGAACTATGCTACTTCCACATGGTGCCTAGAGGAACTTGCCCATATCATTTGGTGTCAGAAGCAGAAGAACCAGCTGGTTATGCCCCTCTTTTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAAACAGCCATGGCTGCTCTTGAAGATAGGTTCAGAGATGACTTGGTGAAAGTGCGGAAATGGAGGTTTGCTTTGTCTGAAGCAGCTTCTTTGTCAAAGGCCTGGATTTTTGAAGATGGGTACGAAACTAGGTTTATGGAAATGATTGTTAAAGATGCATATGCTATGCTGCCTCCGAAAAAATTACATAACATTGGGTACATGGTTGGACTTGAGCCTCGAGTGGAAGAAGTGATCTCACTTTTGAATCAATCCGATGAGAGAGTTTGTATGTTGGGGATTCATGGAATTGGTGGACTTGGCAAAACAACCCTTGCAAAATCAGTCTATAATTCAATCTTCTACCAATTTGAGGGTGCATGTTTTTTATTTGATGTTCAAGAAGCATCAAAGAAATATCTAGGCATGGTTCGCCTCCAACAAAAACTTCTATCAGAGATTCTTGAGGAGAAGACTATGATGATTGGGAGTGTTGATGAAGGAATTTCAAGAATAAAACATAGACTTTCTCACAAAAAGGTTCTTTTGGTTCTTGATGACGTTGATGAGGTTGAACAGTTAGAAAAACTCGCGGGAGGGTGTGATTGGTTTGGTTTTGGAAGCAAAGTCATTATAACAACAAGAAATAAGCAATTGCTAGTTGCACACGATGTTGAAAAAACGTATGAAATGATCAAGTTGAATGAGTATGACTCTGGTGAGCTCTTTTGCTGGCATGCCTTCCAAATGAACCAACCTCCGTTAACCTATCAAGATATGTCTAGTCGTGCACTAAGTTATGCACAAGGCCTTCCTCTGGCATTAAAAGTAATTGGCTCCAATTTGGCAAATAAAAATTTAGAGGAGTGGAAGTCTATATTGGAACAATATGAAAGGATCCCAGAAAGAACAATTCATGAGCTTCTAAAGATAAGCTATAATTGCTTACAGGCTGGTGCTAAGCGTATTTTCTTAGACATTGCTTGTTTTGTTAACAAAGAGATGATGGGATCTATTAAAGAAATAGTAGAAGCTTGTGATTTTGGTGCTAGGTTTTATCTTGAAGTTCTTGTTGATAAATCTCTAATAACTTCAGTTCCTGGAGATGATGACTTTTTCATGCATGATCTAATAAGACAGATGGGAAGAGAGATCGTCAGACAAGAAGCACCATTAAATCCTGAAAAGCGCAGCAGATTATGGTATTACGAAGATGTTCTTAAAGTACTAAGTGAAAATTTAGGATGCAATAATATTGAAGGAATAATGCTTGATCCTCCTCAGCAAGAGAAAGTAAAATGGAGTGGTATGGCCTTTGAGAAGATGAATAACCTTAGAATTCTTGTTGCTCGAAATGTTCAATTTTCAACTGGTCCTACCTATCTACCCAATAGCTTAAGGTGGCTTGAATGGGAGGGGTATCCTTCTGCAACTTTGCCAAAATATTTTTCTCCTTCAGAGTTAATCTTCTTGAAGTTACCTGGAAGTTCTTTTAGACTAAGAGAGCCATCCAAGATTTTCACTAGCTATGTGACACATTTGGATTTTTCATTTTGTGAGTTCATAACTGAAATACCTGATATGTCTCAATGTCAATGTTTACGAAGATTGGATTTGCGATACTGTTTCAATCTGATAAAAGTTCATGATTCATTGGGATCTCTCTCAAAGCTGATGAAACTAGATGTTACTAAATGCACCAAACTTTCCATTTTCCCACGTGAAATCAAGATGGCATCACTTGACAGCCTTTCTTTTAGAGGATGCACAAGTCTTGAGTACTTCCCACATGTAGTGGGAAAGATGGATGCACTAGACTACATTTCAATAGATGGCACTGCTATTAAGGAGCTCCCACCTTCGGTTGGAAATCTTTCTGGTCTTCGATATTTATATATGCATTCCTGCACAAGTCTTAGGGAACTTCCATCCAGCTTGTTCATGTTGCCAAATCTTGAGACGCTTGATTTCGGAGGCGTTCATCCTCAGAACAGAAAGTCTTGGATGAAGTTAATGCAAGATACCGAACCTATTATCTGCAGCTATTATATGAAGAAATTGCTTCTCATGAATTGTGGTCTGTTGGATGAAGAACTTCACCTAATTCTGAACCGTTTTCAAAATTTGCAAGAGTTACATCTATCAAGCAATGATTTTGTGTCCCTCCCACAGTGCATTAAGGAGTGCACCAACTTGTGGGGGCTAGAAGTGAGTGATTGCAAGAGGCTAAGAGACATACCAGAGTTGCCAACAAAGTTGCGTCGTATAGAAGCAGCAAATTGCACATCATTAACTGCAGAATCATTGAACAACTTATATTCTCAGGCAAAAAAGGAATTGCTGAACTTGACAATCATTGTGCCGGCAACAACATTTCCTGATTGGTTCAACTATTGCGGTGAAGGAGACACGTTGTGTTTTCGCGTTCGTGGGAGTTTACCTCGTGGAATTCTCGCATTTGAGGTGGCAGGGAAAGCGAACAGGAGCAAGGAACAAACGTTCCCAGTTTTTATGAGCATCAATGGTGTGGGATTGGTGAGACATGATTTTGATGAAGTGAAACAAGACCATTATGATAAATGGCATATTCAAGCTCAACAAGGTAATTTGTTATTACTTGACGGATTTATTCAATCTACAGAAGAAGAGCAAAAGCATCTGAACAAGTTTATGGGGATGGATTGGAATGAAGTGAGAATACAAGTTGTGACTGACTCGCCAGATACATCAGTTAAGTGGGGAGTTTATGTCTAC | 3111 | 0.3954 | MAIQVSSHSFTGKPKYRFDVFLSFRGEDTRHTFTVPLYNALRRKGINAFIDDKRLGKGEEISPTLLRAIERSRISIIVFSKNYATSTWCLEELAHIIWCQKQKNQLVMPLFYKVDPLDVQYQRNSFETAMAALEDRFRDDLVKVRKWRFALSEAASLSKAWIFEDGYETRFMEMIVKDAYAMLPPKKLHNIGYMVGLEPRVEEVISLLNQSDERVCMLGIHGIGGLGKTTLAKSVYNSIFYQFEGACFLFDVQEASKKYLGMVRLQQKLLSEILEEKTMMIGSVDEGISRIKHRLSHKKVLLVLDDVDEVEQLEKLAGGCDWFGFGSKVIITTRNKQLLVAHDVEKTYEMIKLNEYDSGELFCWHAFQMNQPPLTYQDMSSRALSYAQGLPLALKVIGSNLANKNLEEWKSILEQYERIPERTIHELLKISYNCLQAGAKRIFLDIACFVNKEMMGSIKEIVEACDFGARFYLEVLVDKSLITSVPGDDDFFMHDLIRQMGREIVRQEAPLNPEKRSRLWYYEDVLKVLSENLGCNNIEGIMLDPPQQEKVKWSGMAFEKMNNLRILVARNVQFSTGPTYLPNSLRWLEWEGYPSATLPKYFSPSELIFLKLPGSSFRLREPSKIFTSYVTHLDFSFCEFITEIPDMSQCQCLRRLDLRYCFNLIKVHDSLGSLSKLMKLDVTKCTKLSIFPREIKMASLDSLSFRGCTSLEYFPHVVGKMDALDYISIDGTAIKELPPSVGNLSGLRYLYMHSCTSLRELPSSLFMLPNLETLDFGGVHPQNRKSWMKLMQDTEPIICSYYMKKLLLMNCGLLDEELHLILNRFQNLQELHLSSNDFVSLPQCIKECTNLWGLEVSDCKRLRDIPELPTKLRRIEAANCTSLTAESLNNLYSQAKKELLNLTIIVPATTFPDWFNYCGEGDTLCFRVRGSLPRGILAFEVAGKANRSKEQTFPVFMSINGVGLVRHDFDEVKQDHYDKWHIQAQQGNLLLLDGFIQSTEEEQKHLNKFMGMDWNEVRIQVVTDSPDTSVKWGVYVY | 1037 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2435g00017 | 1037 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 14 | 184 | - | - | |
Pral2435g00017 | 1037 | Gene3D | Ribonuclease Inhibitor | 525 | 696 | IPR032675 | - | |
Pral2435g00017 | 1037 | Coils | Coil | 399 | 419 | - | - | |
Pral2435g00017 | 1037 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 12 | 157 | IPR035897 | - | |
Pral2435g00017 | 1037 | SUPERFAMILY | L domain-like | 542 | 889 | - | - | |
Pral2435g00017 | 1037 | SMART | till_3 | 17 | 157 | IPR000157 | GO:0007165 | |
Pral2435g00017 | 1037 | Gene3D | - | 353 | 436 | IPR042197 | - | |
Pral2435g00017 | 1037 | Gene3D | - | 12 | 185 | IPR035897 | - | |
Pral2435g00017 | 1037 | Pfam | NB-ARC domain | 200 | 422 | IPR002182 | GO:0043531 | |
Pral2435g00017 | 1037 | SUPERFAMILY | "Winged helix" DNA-binding domain | 423 | 529 | IPR036390 | - | |
Pral2435g00017 | 1037 | ProSiteProfiles | TIR domain profile. | 16 | 183 | IPR000157 | GO:0007165 | |
Pral2435g00017 | 1037 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 191 | 446 | IPR027417 | - | |
Pral2435g00017 | 1037 | Gene3D | Ribonuclease Inhibitor | 697 | 904 | IPR032675 | - | |
Pral2435g00017 | 1037 | Gene3D | - | 186 | 352 | IPR027417 | - | |
Pral2435g00017 | 1037 | PRINTS | Disease resistance protein signature | 294 | 308 | - | - | |
Pral2435g00017 | 1037 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Pral2435g00017 | 1037 | PRINTS | Disease resistance protein signature | 387 | 401 | - | - | |
Pral2435g00017 | 1037 | PRINTS | Disease resistance protein signature | 672 | 688 | - | - | |
Pral2435g00017 | 1037 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 19 | 765 | IPR044974 | GO:0006952 | |
Pral2435g00017 | 1037 | Pfam | TIR domain | 18 | 178 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2435g00017 | Pral-Chr2435 | 186885 | 192407 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2435g00017 | 12 | 778 | WRKY Transcription Factor Family | AT4G12020 | 30.506 | 2.27e-88 | 310 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2435g00017 | - | - | pcin:129285870 | 1243.8 |