Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00017 ATGGCTATTCAAGTTTCATCCCATAGCTTCACCGGCAAACCCAAATACAGATTTGATGTTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCACACCTTCACTGTGCCTCTCTACAATGCTTTGCGCCGTAAGGGAATCAATGCCTTCATTGATGACAAGAGGCTTGGGAAAGGGGAAGAGATCTCACCTACGCTTCTTAGAGCCATTGAGAGATCAAGAATTTCCATTATCGTGTTCTCTAAGAACTATGCTACTTCCACATGGTGCCTAGAGGAACTTGCCCATATCATTTGGTGTCAGAAGCAGAAGAACCAGCTGGTTATGCCCCTCTTTTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAAACAGCCATGGCTGCTCTTGAAGATAGGTTCAGAGATGACTTGGTGAAAGTGCGGAAATGGAGGTTTGCTTTGTCTGAAGCAGCTTCTTTGTCAAAGGCCTGGATTTTTGAAGATGGGTACGAAACTAGGTTTATGGAAATGATTGTTAAAGATGCATATGCTATGCTGCCTCCGAAAAAATTACATAACATTGGGTACATGGTTGGACTTGAGCCTCGAGTGGAAGAAGTGATCTCACTTTTGAATCAATCCGATGAGAGAGTTTGTATGTTGGGGATTCATGGAATTGGTGGACTTGGCAAAACAACCCTTGCAAAATCAGTCTATAATTCAATCTTCTACCAATTTGAGGGTGCATGTTTTTTATTTGATGTTCAAGAAGCATCAAAGAAATATCTAGGCATGGTTCGCCTCCAACAAAAACTTCTATCAGAGATTCTTGAGGAGAAGACTATGATGATTGGGAGTGTTGATGAAGGAATTTCAAGAATAAAACATAGACTTTCTCACAAAAAGGTTCTTTTGGTTCTTGATGACGTTGATGAGGTTGAACAGTTAGAAAAACTCGCGGGAGGGTGTGATTGGTTTGGTTTTGGAAGCAAAGTCATTATAACAACAAGAAATAAGCAATTGCTAGTTGCACACGATGTTGAAAAAACGTATGAAATGATCAAGTTGAATGAGTATGACTCTGGTGAGCTCTTTTGCTGGCATGCCTTCCAAATGAACCAACCTCCGTTAACCTATCAAGATATGTCTAGTCGTGCACTAAGTTATGCACAAGGCCTTCCTCTGGCATTAAAAGTAATTGGCTCCAATTTGGCAAATAAAAATTTAGAGGAGTGGAAGTCTATATTGGAACAATATGAAAGGATCCCAGAAAGAACAATTCATGAGCTTCTAAAGATAAGCTATAATTGCTTACAGGCTGGTGCTAAGCGTATTTTCTTAGACATTGCTTGTTTTGTTAACAAAGAGATGATGGGATCTATTAAAGAAATAGTAGAAGCTTGTGATTTTGGTGCTAGGTTTTATCTTGAAGTTCTTGTTGATAAATCTCTAATAACTTCAGTTCCTGGAGATGATGACTTTTTCATGCATGATCTAATAAGACAGATGGGAAGAGAGATCGTCAGACAAGAAGCACCATTAAATCCTGAAAAGCGCAGCAGATTATGGTATTACGAAGATGTTCTTAAAGTACTAAGTGAAAATTTAGGATGCAATAATATTGAAGGAATAATGCTTGATCCTCCTCAGCAAGAGAAAGTAAAATGGAGTGGTATGGCCTTTGAGAAGATGAATAACCTTAGAATTCTTGTTGCTCGAAATGTTCAATTTTCAACTGGTCCTACCTATCTACCCAATAGCTTAAGGTGGCTTGAATGGGAGGGGTATCCTTCTGCAACTTTGCCAAAATATTTTTCTCCTTCAGAGTTAATCTTCTTGAAGTTACCTGGAAGTTCTTTTAGACTAAGAGAGCCATCCAAGATTTTCACTAGCTATGTGACACATTTGGATTTTTCATTTTGTGAGTTCATAACTGAAATACCTGATATGTCTCAATGTCAATGTTTACGAAGATTGGATTTGCGATACTGTTTCAATCTGATAAAAGTTCATGATTCATTGGGATCTCTCTCAAAGCTGATGAAACTAGATGTTACTAAATGCACCAAACTTTCCATTTTCCCACGTGAAATCAAGATGGCATCACTTGACAGCCTTTCTTTTAGAGGATGCACAAGTCTTGAGTACTTCCCACATGTAGTGGGAAAGATGGATGCACTAGACTACATTTCAATAGATGGCACTGCTATTAAGGAGCTCCCACCTTCGGTTGGAAATCTTTCTGGTCTTCGATATTTATATATGCATTCCTGCACAAGTCTTAGGGAACTTCCATCCAGCTTGTTCATGTTGCCAAATCTTGAGACGCTTGATTTCGGAGGCGTTCATCCTCAGAACAGAAAGTCTTGGATGAAGTTAATGCAAGATACCGAACCTATTATCTGCAGCTATTATATGAAGAAATTGCTTCTCATGAATTGTGGTCTGTTGGATGAAGAACTTCACCTAATTCTGAACCGTTTTCAAAATTTGCAAGAGTTACATCTATCAAGCAATGATTTTGTGTCCCTCCCACAGTGCATTAAGGAGTGCACCAACTTGTGGGGGCTAGAAGTGAGTGATTGCAAGAGGCTAAGAGACATACCAGAGTTGCCAACAAAGTTGCGTCGTATAGAAGCAGCAAATTGCACATCATTAACTGCAGAATCATTGAACAACTTATATTCTCAGGCAAAAAAGGAATTGCTGAACTTGACAATCATTGTGCCGGCAACAACATTTCCTGATTGGTTCAACTATTGCGGTGAAGGAGACACGTTGTGTTTTCGCGTTCGTGGGAGTTTACCTCGTGGAATTCTCGCATTTGAGGTGGCAGGGAAAGCGAACAGGAGCAAGGAACAAACGTTCCCAGTTTTTATGAGCATCAATGGTGTGGGATTGGTGAGACATGATTTTGATGAAGTGAAACAAGACCATTATGATAAATGGCATATTCAAGCTCAACAAGGTAATTTGTTATTACTTGACGGATTTATTCAATCTACAGAAGAAGAGCAAAAGCATCTGAACAAGTTTATGGGGATGGATTGGAATGAAGTGAGAATACAAGTTGTGACTGACTCGCCAGATACATCAGTTAAGTGGGGAGTTTATGTCTAC 3111 0.3954 MAIQVSSHSFTGKPKYRFDVFLSFRGEDTRHTFTVPLYNALRRKGINAFIDDKRLGKGEEISPTLLRAIERSRISIIVFSKNYATSTWCLEELAHIIWCQKQKNQLVMPLFYKVDPLDVQYQRNSFETAMAALEDRFRDDLVKVRKWRFALSEAASLSKAWIFEDGYETRFMEMIVKDAYAMLPPKKLHNIGYMVGLEPRVEEVISLLNQSDERVCMLGIHGIGGLGKTTLAKSVYNSIFYQFEGACFLFDVQEASKKYLGMVRLQQKLLSEILEEKTMMIGSVDEGISRIKHRLSHKKVLLVLDDVDEVEQLEKLAGGCDWFGFGSKVIITTRNKQLLVAHDVEKTYEMIKLNEYDSGELFCWHAFQMNQPPLTYQDMSSRALSYAQGLPLALKVIGSNLANKNLEEWKSILEQYERIPERTIHELLKISYNCLQAGAKRIFLDIACFVNKEMMGSIKEIVEACDFGARFYLEVLVDKSLITSVPGDDDFFMHDLIRQMGREIVRQEAPLNPEKRSRLWYYEDVLKVLSENLGCNNIEGIMLDPPQQEKVKWSGMAFEKMNNLRILVARNVQFSTGPTYLPNSLRWLEWEGYPSATLPKYFSPSELIFLKLPGSSFRLREPSKIFTSYVTHLDFSFCEFITEIPDMSQCQCLRRLDLRYCFNLIKVHDSLGSLSKLMKLDVTKCTKLSIFPREIKMASLDSLSFRGCTSLEYFPHVVGKMDALDYISIDGTAIKELPPSVGNLSGLRYLYMHSCTSLRELPSSLFMLPNLETLDFGGVHPQNRKSWMKLMQDTEPIICSYYMKKLLLMNCGLLDEELHLILNRFQNLQELHLSSNDFVSLPQCIKECTNLWGLEVSDCKRLRDIPELPTKLRRIEAANCTSLTAESLNNLYSQAKKELLNLTIIVPATTFPDWFNYCGEGDTLCFRVRGSLPRGILAFEVAGKANRSKEQTFPVFMSINGVGLVRHDFDEVKQDHYDKWHIQAQQGNLLLLDGFIQSTEEEQKHLNKFMGMDWNEVRIQVVTDSPDTSVKWGVYVY 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00017 1037 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral2435g00017 1037 Gene3D Ribonuclease Inhibitor 525 696 IPR032675 -
Pral2435g00017 1037 Coils Coil 399 419 - -
Pral2435g00017 1037 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
Pral2435g00017 1037 SUPERFAMILY L domain-like 542 889 - -
Pral2435g00017 1037 SMART till_3 17 157 IPR000157 GO:0007165
Pral2435g00017 1037 Gene3D - 353 436 IPR042197 -
Pral2435g00017 1037 Gene3D - 12 185 IPR035897 -
Pral2435g00017 1037 Pfam NB-ARC domain 200 422 IPR002182 GO:0043531
Pral2435g00017 1037 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Pral2435g00017 1037 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Pral2435g00017 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 446 IPR027417 -
Pral2435g00017 1037 Gene3D Ribonuclease Inhibitor 697 904 IPR032675 -
Pral2435g00017 1037 Gene3D - 186 352 IPR027417 -
Pral2435g00017 1037 PRINTS Disease resistance protein signature 294 308 - -
Pral2435g00017 1037 PRINTS Disease resistance protein signature 217 232 - -
Pral2435g00017 1037 PRINTS Disease resistance protein signature 387 401 - -
Pral2435g00017 1037 PRINTS Disease resistance protein signature 672 688 - -
Pral2435g00017 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 765 IPR044974 GO:0006952
Pral2435g00017 1037 Pfam TIR domain 18 178 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00017 Pral-Chr2435 186885 192407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00017 12 778 WRKY Transcription Factor Family AT4G12020 30.506 2.27e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2435g00017 - - pcin:129285870 1243.8