Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00016 ATGGCCATTCAAGTTTCATCCCACAGCTTCACTGTCAAACGCAAATACAGATTTGATGTTTTTTTGAGTTTCAGAGGCGAAGATACTCGCCACACCTTCACTGTGCCTCTCTACAATGCTTTGCGGCGTAAGGGAATCAACGCCTTCATTGACGACAAGAGGCTTGGAAAAGGGGAAGAGATCTCACCTACGCTTCTTAAAGCAATTGAGAGATCAAGAATTTCCATTATTGTGTTCTCTAAGAACTATGCTACTTCAACATGGTGCCTAGAGGAACTCGCTCATATCATTTGGTGTCAGAAGCAGAACAAACAGCTGGTTATGCCCCTTTTTTACAAGGTGGATCCGATAGATGTTCAATATCAGAGAAATAGCTTTGAAACAGCCATGGCTGCTTATGAAGATAGGTTCGGAGATGACCCAGAGAAAGTGCAGAAATGGAGGTTTGCTTTGTCTGAAGCAGCTTCTCTGTCAAAAGCCTGGCTTTTTGAAGATGGGTATGAATTTGGGTTTATTGAAAGGATTGTTAAAGATGCATATGCTATGTTGCCTCCTAAACGCTTACATAGTCCTGGGTACATGGTTGGACTTGAGCCTCGCGTGGAAGAAGTGATTTCACTTTTAAATCAATCCAATGACAGAGTTTGCATGTTGGGCATTCATGGAACTGGTGGAATTGGCAAAACAACACTTGCAAAGGCTGTCTATAATTCAATGTTTTACCAGTTTGAAGGTGCATGTTTTTTGTTTGATGTCAAAGAAGCAACAAAGAAATACCAGGGCATCGTTCGCCTCCAACAGAAACTTCTATCAAAGATTCTTGCGGAGAAGATTATGATGATTGGGAGTGTTGATAAAGGAATGTCAAGAATAAAACATAGACTTTCTCACAAAAGGGTTCTTTTGGTTCTTGATGATGTTGATGAGGTTGAACAGTTAGGACAACTTGCGGGAGGATGCGATTGGTTTGGTTTTGGAAGCAAAGTTATTATAACAACAAGAAATAAGCAAATGCTAGTTGCACACAATGTTGGAAAAATATATGAAATGATGAAGCTGAATGAGTATGACTCTTGTGAGCTCTTTTGTTGGCATGCCTTCCAAATGAACCAACCTCCCTTAACCTATCAAGATATGTCTAGTCGTGCAATGAGTTATGCACAAGGCCTTCCTCTGGCATTAAAAGTAATAGGCTCCAATTTGGCAGATAAAAATTTAGAGGAATGGAAGTTTATGATGGAACAATATGAAAGGATCCCAGAAAGAACAATTCATGAGCTTCTAAAGATAAGCTATAATTTCTTACAAGCTGGTGCTAAGCATATTTTCCTAGATATTGCTTGTTTTATTACCAACGAGATGATGAGATCTATTAAAGAAATAGTAGAAGCTTGTGATTTTGGTGCTAGGTTTTATCTTGAAGTTCTTGTCGACAAATCTCTGATAACTTTAGTTGATGGTGGTAATTTTTTTTTCATGCATGATCTAATACGACAGATGGGAAGAGAGATTGTCAGACAAGAGGCACCATTAAATCCTGAAAAGCGCAGTAGATTATGGTATTACAAAGACGTTCTTAAGATACTGCGTGAAAATCTAGGATGCAATAATGTTGAAGGAATAATGCTTGATCCTCCAGAACAAGAGGAAGTAAACTGGAGTGGTACGGCCTTTGAGAAGATGAATAATATTAGAATTCTTGTTGTTCGAAATGTTCAATTTTCAACTGGCCCTACCTATCTTCCTAATAGTTTAAGGTGGCTTGAATGGGAGGGATACCCTTCTGCAACTTTGCCAAAAGATTTTTATCCTTCAGAGCTAATTTTCTTGAAGTTGCCTAGAAGCTCTTATAGACTAAGAGAGCCATGCAAGCTGTAA 1878 0.3887 MAIQVSSHSFTVKRKYRFDVFLSFRGEDTRHTFTVPLYNALRRKGINAFIDDKRLGKGEEISPTLLKAIERSRISIIVFSKNYATSTWCLEELAHIIWCQKQNKQLVMPLFYKVDPIDVQYQRNSFETAMAAYEDRFGDDPEKVQKWRFALSEAASLSKAWLFEDGYEFGFIERIVKDAYAMLPPKRLHSPGYMVGLEPRVEEVISLLNQSNDRVCMLGIHGTGGIGKTTLAKAVYNSMFYQFEGACFLFDVKEATKKYQGIVRLQQKLLSKILAEKIMMIGSVDKGMSRIKHRLSHKRVLLVLDDVDEVEQLGQLAGGCDWFGFGSKVIITTRNKQMLVAHNVGKIYEMMKLNEYDSCELFCWHAFQMNQPPLTYQDMSSRAMSYAQGLPLALKVIGSNLADKNLEEWKFMMEQYERIPERTIHELLKISYNFLQAGAKHIFLDIACFITNEMMRSIKEIVEACDFGARFYLEVLVDKSLITLVDGGNFFFMHDLIRQMGREIVRQEAPLNPEKRSRLWYYKDVLKILRENLGCNNVEGIMLDPPEQEEVNWSGTAFEKMNNIRILVVRNVQFSTGPTYLPNSLRWLEWEGYPSATLPKDFYPSELIFLKLPRSSYRLREPCKL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00016 625 Pfam NB-ARC domain 199 419 IPR002182 GO:0043531
Pral2435g00016 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 446 IPR027417 -
Pral2435g00016 625 SMART till_3 17 157 IPR000157 GO:0007165
Pral2435g00016 625 Gene3D - 11 186 IPR035897 -
Pral2435g00016 625 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Pral2435g00016 625 Pfam TIR domain 18 163 IPR000157 GO:0007165
Pral2435g00016 625 Gene3D - 187 346 IPR027417 -
Pral2435g00016 625 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
Pral2435g00016 625 PRINTS Disease resistance protein signature 294 308 - -
Pral2435g00016 625 PRINTS Disease resistance protein signature 387 401 - -
Pral2435g00016 625 PRINTS Disease resistance protein signature 217 232 - -
Pral2435g00016 625 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Pral2435g00016 625 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 616 IPR044974 GO:0006952
Pral2435g00016 625 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral2435g00016 625 Gene3D - 352 436 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00016 Pral-Chr2435 174720 178512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00016 18 618 WRKY Transcription Factor Family AT4G12020 30.995 8.28e-71 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2435g00016 - - pcin:129286217 891.338