Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00015 ATGGCAGCACCATCATCGGCTGTCTTCGCCGGCAAATCCAAGTACAGATATGACGTTTTCCTCAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGTTCATCTCTACGATGCTCTGCGCCGGAAGGGAATCAACGCCTTCATTGACGACAAGAAGCTCGGGAAAGGTGAGCGGATCTCACCTACGCTTCTTAAGGCCATTGAGAAATCCAGAATCTCGATTATTGTGTTCTCTAGGAATTATGCAACTTCCACATGGTGCCTCGATGAACTCGCCCACATCATTCGGTGTAAGAAGGAGAAGAACCAACTGGTCATGCCCGTATTTTACAATGTGGATCCGATGGATGTTCAATATCAGAGGAACAGCTTTGGAGATGCCATGGCTGCTCTGGAAGATAGATTCAGAGATGACTTGAAGAAAGTGCGAAAATGGAGATCTGCTTTGTCTGAAGCTGCTAGTTTGCCATCAGCATGGCTTTTGGGAGATGGAGATGGATGTGGGTTTATTGAAAAGATTGTTGAAGATGCATATGCTATGTTACCTCCTAAACGCTTGCATTGCCGTGAGTACATGGTTGGACTTGGGCCTCGCATAGAAATGATGAAGTCACTTTTGGATCATTCTAATGATGGCATTTGTATGTTGGGGATTTATGGAACTGGTGGGGTTGGAAAAACAACCCTTGCAAAGGCTTTGTATAATTCAATCTTCTACCAATTTGAAGGCGCGTGTTTTTTGTTTGATGTTAGAGAAGTGTCAAAGAAATACCAGGGCATTAAGACAAAGTTTGGCAGTGCTGATGAAGGAATATCCAGAATAAAACACAGGCTCTCTCACAAAAGAATCCTATTGGTTCTTGATGATGTTGATGAGGTTGAACAGTTAGAAAAACTAGCAGGTGGGCGTCATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAACAGTTGCTAGTTGTGTGTAATGTTGAGGAAACATATGAAATGAAGAGGCTAGATGATCATGACTCTCTTGAACTCTTTTGCTGGCATGCATTCCATTTGAACCAGCCTCCAAAAGGCTATGAAAAAATGTCCAAACGTGTGATGAGATTTGCAAAGGGCCTTCCTTTGGCTTTAAGAGTAATTGGCGCCAATTTGGCACATAAAAATTTAGAGGAATGCAGGTCTATATTAGAACAATATGAGAGGATCCCAGAAAGAACAATTCTAGATGTACTCAAGATAAGCTATGATTGCTTACAAGATGGTGCCAAGGGTATTTTTCTAGATATTGCTTGTTTCTTTAAAGAGGAGGATTTGGAATCTGTTGAAGAAAAACTAGCAGCTTGCGATTTTGGTGCAAGGTTTTACATTGAAGTTCTTGTTGACAAGTCTCTTATAACTGTTGCTGATAACGGTAACTTGGGCATGCATGATTTAGTACAACAAATGGGTAGAGAGATTGTTAGGCAGGAGGCACCATCAAATCCTTGTAAACGCAGTAGATTATGGCATTACAAAGATGTTCTTGAAGTATTGCGTGAAAATCTAGGGAGCAGTAATATTGAAGGAATAATGCTTGATCCGCCTCAACAAGAAGAAGTGGAGTGGAGTGGTATGGCCTTTGAGAAGATGAGTAATCTTAGGATTCTTGTGGTTCGGAATTCACAATTTTCAACCAACCCAAAGTATCTTCCAAGTAGTTTAAGATTGCTTGACTGGGCGGGATGCCCTTCTACTATTCTACCACCAGACTTTTCTCCTAAGAAACTAGTTTACATCAAATTATCCGGTAGTCTTTTTAGATTGGAAGAGCCATTCAAGAGGTTTGAATGTGTGACATATATGAATTTCTCACACTGTAAATTCATAACTGAAGTACCTGATATGTCTCAATTTCAAAATTTAAGAAGATTGTTATTTACAAGGTGTCGCAATCTCATCAAAGTTCACGATTCAGTTGGATCCTTGTCTAAGCTCGTCGAATTAAACCTTAGTGTGTGCAGCAGTCTTACAAGCTTTCCACGTGAAATCAATATGGCTTCTCTTCAGAAGCTTCATCTCAGTTATTGCAGGAGTCTTGACTACTTCCTGTGTATAGTGGGAAAGATGGATGCACTGAGGACAATTTATGCAGAAGGCACTGCTATTAAAGAGCTCCCGCCTTCCATTGGAAATCTTCCAAGACTCGAATCTTTAGCTATAAGCACCCACAAAAGTATTAGGGAGCTTCCAAGCTGCTTATTCACATTGCAAAACCTTAGTCGGCTTAATCTAAGTGGGAGCAATTTTGTTTCCCTTCCTGAGTGCATCAAAGAGTGTGCTAATCTGCAGACACTAGCGCTGAATAACTGCAAGAGGCTTAGAGACATACCAGAGTTGCCATCAAAATTGGAAAATATAGAGGCAGAGGATTGTACATCATTAACTACAGAGTCATTAGGCCATCTATGGTCTCAGGCGAGAAACGGGTACTCCCACTTGAACATCGCTATGCCATCAACAACAGTTCCTGATTGGTTCAACGAATGCTGTAAAGGAGGGACATTGTCTTTTCGGGCTCGTGGGCATTTCCCTCATGCTGCCTTTGCATTTGAGTTGGGGAAAGCAAACAAAAATTCAAAACACTTTTTCCATGTTTCTGTGAGCATCAATGGTCATAAAACACAAAGGAGACAAGATGCTGCAAATTATGGAACTAGGCAAGGCCATCTGTTTTTATTTGATCTGAGAATGGCTTTTGAGCCAGAAGAGTGGGAGAGGCTTGATAGTTTTCTGGAACTGGATTGGAATGATGCGGAAATAAAAGTCCTATGTCTAATCCCCCGCAAGAAAAAGAAAGTCACGAAGTTAACAGCAGAAATGCCCGTAGTTAGTTGTGGAGTTTATGTGTACAAACGGCAAACAAACATGGAGAATGTCCAGTTCGGGTCTTCTATGCTCTCCTCGAATGCTCCAACAACTTCAATGAAACAAAGAGCGGTCACTTCTCCTCCTAATGAACCACCCAAGAAGTTATTGAGAATGTTCAAGGTTGCTGATAAAGGAAAACTCAATAATACAGAAAGGGATAAGGAGAATTAA 3081 0.4122 MAAPSSAVFAGKSKYRYDVFLSFRGEDTRHSFTVHLYDALRRKGINAFIDDKKLGKGERISPTLLKAIEKSRISIIVFSRNYATSTWCLDELAHIIRCKKEKNQLVMPVFYNVDPMDVQYQRNSFGDAMAALEDRFRDDLKKVRKWRSALSEAASLPSAWLLGDGDGCGFIEKIVEDAYAMLPPKRLHCREYMVGLGPRIEMMKSLLDHSNDGICMLGIYGTGGVGKTTLAKALYNSIFYQFEGACFLFDVREVSKKYQGIKTKFGSADEGISRIKHRLSHKRILLVLDDVDEVEQLEKLAGGRHWFGCGSKVIITTRNKQLLVVCNVEETYEMKRLDDHDSLELFCWHAFHLNQPPKGYEKMSKRVMRFAKGLPLALRVIGANLAHKNLEECRSILEQYERIPERTILDVLKISYDCLQDGAKGIFLDIACFFKEEDLESVEEKLAACDFGARFYIEVLVDKSLITVADNGNLGMHDLVQQMGREIVRQEAPSNPCKRSRLWHYKDVLEVLRENLGSSNIEGIMLDPPQQEEVEWSGMAFEKMSNLRILVVRNSQFSTNPKYLPSSLRLLDWAGCPSTILPPDFSPKKLVYIKLSGSLFRLEEPFKRFECVTYMNFSHCKFITEVPDMSQFQNLRRLLFTRCRNLIKVHDSVGSLSKLVELNLSVCSSLTSFPREINMASLQKLHLSYCRSLDYFLCIVGKMDALRTIYAEGTAIKELPPSIGNLPRLESLAISTHKSIRELPSCLFTLQNLSRLNLSGSNFVSLPECIKECANLQTLALNNCKRLRDIPELPSKLENIEAEDCTSLTTESLGHLWSQARNGYSHLNIAMPSTTVPDWFNECCKGGTLSFRARGHFPHAAFAFELGKANKNSKHFFHVSVSINGHKTQRRQDAANYGTRQGHLFLFDLRMAFEPEEWERLDSFLELDWNDAEIKVLCLIPRKKKKVTKLTAEMPVVSCGVYVYKRQTNMENVQFGSSMLSSNAPTTSMKQRAVTSPPNEPPKKLLRMFKVADKGKLNNTERDKEN 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00015 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 430 IPR027417 -
Pral2435g00015 1026 MobiDBLite consensus disorder prediction 980 995 - -
Pral2435g00015 1026 SUPERFAMILY L domain-like 526 818 - -
Pral2435g00015 1026 PRINTS Disease resistance protein signature 654 670 - -
Pral2435g00015 1026 PRINTS Disease resistance protein signature 216 231 - -
Pral2435g00015 1026 PRINTS Disease resistance protein signature 371 385 - -
Pral2435g00015 1026 PRINTS Disease resistance protein signature 278 292 - -
Pral2435g00015 1026 Gene3D - 190 332 IPR027417 -
Pral2435g00015 1026 Gene3D - 336 420 IPR042197 -
Pral2435g00015 1026 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Pral2435g00015 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 744 IPR044974 GO:0006952
Pral2435g00015 1026 Gene3D - 11 189 IPR035897 -
Pral2435g00015 1026 MobiDBLite consensus disorder prediction 980 1026 - -
Pral2435g00015 1026 ProSiteProfiles TIR domain profile. 15 182 IPR000157 GO:0007165
Pral2435g00015 1026 MobiDBLite consensus disorder prediction 1006 1026 - -
Pral2435g00015 1026 Gene3D Ribonuclease Inhibitor 519 845 IPR032675 -
Pral2435g00015 1026 SUPERFAMILY "Winged helix" DNA-binding domain 407 512 IPR036390 -
Pral2435g00015 1026 Pfam TIR domain 17 161 IPR000157 GO:0007165
Pral2435g00015 1026 SMART till_3 16 156 IPR000157 GO:0007165
Pral2435g00015 1026 Pfam NB-ARC domain 203 395 IPR002182 GO:0043531
Pral2435g00015 1026 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00015 Pral-Chr2435 160442 168239 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00015 17 804 WRKY Transcription Factor Family AT4G12020 31.425 1.23e-96 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2435g00015 - - pcin:129284776 1234.94