LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2435g00010	ATGGCGACTCAAGTTGAAACAACATCATCCTTTGGCTCCAATAACAAAACCGAGTATAGATATGATGTTTTTCTGAGTTTTAGAGGTGAAGATACTCGCCACACCTTCACTGTGCCTCTCTACAATGCTTTGCGATGTAAGGGAATCAATGCCTTCATTGACGACAGGAAGCTTGGCAAAGGGGAAGAGATCTCACCTACGCTTCTTAGAGCCATTGAGAGATTGAGAATTTCCTTCATTGTGTTCTCTAGGAGCTATGCTACTTCCACATGGTGCCTAGAGGAACTCGCCCATATCATTTGGTGTCAGAAGCGGAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAAAAATAGCTTTCAGGAAGCCATGGCTGCTCCTGAAGATAGGTTCAGCGATGACTTGGAGAAAGTGCGCAAATGGAGATCTGCTTTGTTTGAAGCTGCTAGCTTATCACTGGCATGGCTTTTCGAAGAAGATGGATGCAACGAAGGTGGATTTATTGAGGGTATTGCTGAAGATGCATACGCTAGGCTACCTCCTAAACGCTTCCATAACGTTGATTACATCGTCGGACTTGAGCCTTGCATAGAAGAAGTCATGTCACTTTTGAATGAGTCTGATAATAGTGTTTCTATGTTGGGGATTCATGGAGCTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCCATCTATAACTCAATCTTCTTCTATTTTGAAGGTGCTTGTTTTTTATTTGATGTCAGAGAAGTGTCAAAGAAATATCAGGGTGTTGTCCGCCTTCAACGAACACTTCTATCAGAAGTTCTTGAGGAAAAGAAGATGAAGTTGGGTAGTGTTGATGAAGGAATATCAAAAATAAAGCATAGACTCTCTCACAAAAAGATTTTGTTGATTCTTGATGACGTTGAAGAAGTTGAGCAGTTAGAACAACTTGCAGGAGGGGCTGATTGGTTTGGTTGTGGAAGCAAGATCATCATAACAACAAGAAACAAGCAATTGCTAGTTGCACACGATCTTAAAAAAACATATGAAATGAAACAGCTGAATGAGCATGACTCTCTTAAACTGTTTTGTTGGCATGCCTTTCGAATGAGCCACCCTCCAAAAAGCTACAAAAGTATGTCAATTGGTGTTACAGATTATGTACGTGGCCTTCCTTTGGCCTTAAAATTGATAGGCTCCAATTTGAGACATAGAAAATTAGCGGAATGGAGATATACACTACAACAATATAACCAAATCACTGGAAGAACAATACATGAGATATTGAAAATAAGCTATGATTGCTTACAAGAGGGTGCTAAGCGTATTTTTCTGGACATTGCTTGTTTCTTTAAAGAGGAGAATTTGGAATATGTTGAAGACATACTAGGAGCTTGTTATTATGGGACAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTAATAACTGTTGCTGATAATGGTCGCTTGCACATGCATGATCTAATACAACAAATGGCTAGAGAGATTGTTAAGCAAGAGGCACCCTCCAGTCTTGGTAAACGTAGCAGGTTATGGTATTACAAAGATGTGCTTAATGTGCTGCAAAATAATTTAGGAGGAAATGATATTGAAGGGATAATCCTTGATCCACCTAAACAAGAAGAAGTGATATGGAATGGTTTGGCCTTTCAGAAGATGAAAAATCTTCAATTTCTCATTGTTCGAAATACCCAATTCTTAACAAGTCCCAAGTATCTTCCTAATAGTTTGATATTGCTTGATTGGGAGAGATATCCTTCTATGACTTTACCACCAGATTTTTCTCCTCCAAAACTAGTTTGCTTCAAGTTATATAGAAGTCTTTTCAAATTGGAAGAGCCATTCCAGAAGTATGAATATGTGACATATATGAATTTCTCGCAATGTGAATTCTTGAGAGAAGTGCCTGATATGTCTCATTTTCGAAATTTAAAAACATTGAGCTTTCGCGAATGTTGCAATCTGATCAAAGTTCATGATTCTGTGGGATCTCTTCATAAGCTAATACTATTAGATGTTGGTGAATGTACCAAACTTAAAAGCTTTCCATGTGAAATCAACATGCCATGTCTTGAAGATCTCACTCTTTCTGGCTGCAAGAGTCTTAACTACTTGCCACGTATCGTCGGAAAGATGGATGCACTTACCGGTATTTCTGCAGATAGGACTGCTATTAAAGAGCTCCCACCTTCCATTGGAAATCTTTCAGGGCTTGATACTTTGTTTATACACTCTTGCAAAAGTCTTAGGGAGCTTCCGACCAGCTTATTGATGTTGCAAAATCTTAGCACACTTTTGTTGGGAGGCATTCAACCTCGTGGTAGAAAATCTTTAAAGAAACTAATGCAAGAGAGTCAACCATTGACTAGTTGCGCAAACATGGAGTTCCTGGGACTTGGAAACTGTGGCTTGTTGGATGAAGATGTTTACCTTACTCTAAAATGTTTTCAGAATGTGCATCACTTGGATCTATCAAGAAATGATTTTGTGTCAATTCCTGACTGTATTAAAGAGTGTGCTAATTTGAGGGTACTAGAAATACATAATTGCAAGAGGCTAAGAGACATACCAGAGTTGCCATCAGGGTTGAATGACATAAGGGCAGAGAATTGCACATCACTAACAACTGAGTCAGTAGGCCGTTTATGGTCTCAGGCTAAAATCTTCTTTTGCAAAGGAGTTGGTATGCCGGCAACAACATTTCCTGATTGGATTGATTATTGCTGTAAAGGAGGCACATTGTCTCTTCGTGTTCATGGGAAAACTTTCCCCCGTCTTGTTGTTGCAATTGAATCAGGGAAAACAAAGACAAGAAAGAGTATTCCCTTCCAAGTTTTTATGAGAATCAATGGTCGTCAAATGTCATGGATAGAAGGTGATGTTCCTTATGTGCCTGATGCAAAATTTTCATGA	2949	0.3917	MATQVETTSSFGSNNKTEYRYDVFLSFRGEDTRHTFTVPLYNALRCKGINAFIDDRKLGKGEEISPTLLRAIERLRISFIVFSRSYATSTWCLEELAHIIWCQKRKNQLVMPIFYKVDPLDVQYQKNSFQEAMAAPEDRFSDDLEKVRKWRSALFEAASLSLAWLFEEDGCNEGGFIEGIAEDAYARLPPKRFHNVDYIVGLEPCIEEVMSLLNESDNSVSMLGIHGAGGIGKTTLAKAIYNSIFFYFEGACFLFDVREVSKKYQGVVRLQRTLLSEVLEEKKMKLGSVDEGISKIKHRLSHKKILLILDDVEEVEQLEQLAGGADWFGCGSKIIITTRNKQLLVAHDLKKTYEMKQLNEHDSLKLFCWHAFRMSHPPKSYKSMSIGVTDYVRGLPLALKLIGSNLRHRKLAEWRYTLQQYNQITGRTIHEILKISYDCLQEGAKRIFLDIACFFKEENLEYVEDILGACYYGTRFYIEVLVDKSLITVADNGRLHMHDLIQQMAREIVKQEAPSSLGKRSRLWYYKDVLNVLQNNLGGNDIEGIILDPPKQEEVIWNGLAFQKMKNLQFLIVRNTQFLTSPKYLPNSLILLDWERYPSMTLPPDFSPPKLVCFKLYRSLFKLEEPFQKYEYVTYMNFSQCEFLREVPDMSHFRNLKTLSFRECCNLIKVHDSVGSLHKLILLDVGECTKLKSFPCEINMPCLEDLTLSGCKSLNYLPRIVGKMDALTGISADRTAIKELPPSIGNLSGLDTLFIHSCKSLRELPTSLLMLQNLSTLLLGGIQPRGRKSLKKLMQESQPLTSCANMEFLGLGNCGLLDEDVYLTLKCFQNVHHLDLSRNDFVSIPDCIKECANLRVLEIHNCKRLRDIPELPSGLNDIRAENCTSLTTESVGRLWSQAKIFFCKGVGMPATTFPDWIDYCCKGGTLSLRVHGKTFPRLVVAIESGKTKTRKSIPFQVFMRINGRQMSWIEGDVPYVPDAKFS	982

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2435g00010	982	Gene3D	Ribonuclease Inhibitor	525	716	IPR032675	-
	Pral2435g00010	982	Gene3D	Ribonuclease Inhibitor	717	901	IPR032675	-
	Pral2435g00010	982	Gene3D	-	357	441	IPR042197	-
	Pral2435g00010	982	ProSiteProfiles	TIR domain profile.	19	188	IPR000157	GO:0007165
	Pral2435g00010	982	Pfam	TIR domain	21	184	IPR000157	GO:0007165
	Pral2435g00010	982	SUPERFAMILY	L domain-like	511	896	-	-
	Pral2435g00010	982	SUPERFAMILY	"Winged helix" DNA-binding domain	428	533	IPR036390	-
	Pral2435g00010	982	FunFam	Disease resistance protein (TIR-NBS-LRR class)	17	188	-	-
	Pral2435g00010	982	PRINTS	Disease resistance protein signature	392	406	-	-
	Pral2435g00010	982	PRINTS	Disease resistance protein signature	698	714	-	-
	Pral2435g00010	982	PRINTS	Disease resistance protein signature	222	237	-	-
	Pral2435g00010	982	PRINTS	Disease resistance protein signature	299	313	-	-
	Pral2435g00010	982	SUPERFAMILY	Toll/Interleukin receptor TIR domain	13	160	IPR035897	-
	Pral2435g00010	982	Pfam	NB-ARC domain	206	438	IPR002182	GO:0043531
	Pral2435g00010	982	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	190	451	IPR027417	-
	Pral2435g00010	982	Gene3D	-	14	191	IPR035897	-
	Pral2435g00010	982	SMART	till_3	20	160	IPR000157	GO:0007165
	Pral2435g00010	982	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	21	796	IPR044974	GO:0006952
	Pral2435g00010	982	Gene3D	-	192	352	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2435g00010	Pral-Chr2435	109122	114070	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2435g00010	21	848	WRKY Transcription Factor Family	AT4G12020	30.224	1.02e-84	298

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2435g00010	-		-	pcin:129284776	1355.89