Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00005 ATGGCGATTCAAGTGGCTTCACCATCATCCCATAGCTTCACCAGCGAAGCTAAGTATCGATATGATGTTTTCCTGAGTTTCAGAGGTGAAGATACTCGCCACATCTTCACTGTACCTCTCTACGATGCTTTGCACCGTAAGGGAATCAACGCCTTCATTGATGACAAGAAGCTTGGGAAAGGGGAAAAGATCTCACCTTCGCTTCTTAAGGCCATTGAGAGATCCAGGATTTCCATTATTGTGTTCTCTAAGAACTATGCTACTTCCACTTGGTGCCTGGAGGAACTTGCTCACATCGTTTGGTGTAAGGAGGAAAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTAGATCCGATGGATGTTCAGTATCAGAGAAACAGCTTTGAGGAAGCCATGGCTGTTCTTGGAGAAAGATTCAGAGATGACACGGAGAAAGTTAGAAAATGGAGATCTGCTTTGTTTGAAGCTGCTAGCTTGTCATCAGCATGGCTTTTGAAAGATGGATACCAAGATGGATTTATTGAAAGTATCGTTGAAGATGCATATGCTAGGCTACCTCCTAAGCGCTACCATAACGTTGATTACATCGTCGGACTTGAGCCTTGTATAGAAGAAGTGATGTCACTTTTGGATGAAAGTGATGAAAATAGAGTTTGTATGTTGGGAATTTATGGAATTGGTGGGATTGGCAAAACAACCCTAGCAAAAGCTGTCTATAATTCAGTCTTCTACAATTTTGAAGGTGCTTGTTTTTTGTTTGATGTTCGAGAAATATCAAAGAAATATCAAGGTGTTGTTAGCCTTCAACGAACACTACTATCAGAAATTCTAGATGAAAACAAGATTAAGTTTTGTAGTGTTGACGAAGGAATATCAAAAATAAAACATAGGCTCTCTCGCAAAAAGATTCTATTGGTTCTTGATGACGTTGAAGAAGTTGAACAGTTAGAACAACTTGCAGGAGGATGTGATTGGTTTGGTGGTGGAAGCAAGATCATTATAACAACAAGAAACAAGCAATTACTAATTGCATGCAATATTACAAAGACATATGAAATGAAGGAGTTAAATGAGCGTTACTCTCTTGAGCTTTTTTGTTGTCATGCATTTCGAAAGAGCCAACCTCCAAAAGTATACAAAAGTATGTCCATTGGTATTACACATTATGTACGTGGCCTTCCTTTGGCTTTAAAGTTGATAGGCTCCAATTTGGCACACAAAGACTTAGAGGAATGGAGATATACATTGACACAATATTATAAAATCTCAAGAACAACAATATATGAGATATTGAAAGTAAGCTATGATTGCTTACAAGATGATGCTAAGCGTGTTTTCTTGGACATTGCTTGTTTCTTTAAAACGGAGACATTGGAATTGGTTGAAGAAATACTAGGAGCTTGTTACTATGGGACAAGGTTTTATATTGAGGTTCTTGTTGATAAATCTTTGATAACTATTGCTGATAATGGTCTCTTGCTGATGCATGATCTAATACAACAAATGGGTAAAAAGATTGTTGAGCAAGAGGCACCCTCAAATCCTGGTAGACGTAGCAGGTTATGGTATTACAAAGATGTTCTTAATGTGCTGCGTAAAGATTTAGGAGAAAATGATATTGAAGGAATAATACTTGATCCACCTGAACAAGAAGAAGTGAAGTGGAATGGTTTAGCCTTTGAGAAGATGGATAATCTTCGTATTCTCATTGTTCGAAATACCCAATTCTTAACAAGTCCCAAGTATCTTCCCAATAGTTTGATATTGCTTGATTGGGAGGGATATCCTTCTATGACTTTACCGCCGGATTTTTCTCCTCCAAAACTAGTTTGCTTCAAGTTATGTAGAAGTCTTTTCAGATTTGAAGCGCCATTCCAGAATCATCAACTATTTCACGATCCAAAGGAGATTTGTTAA 1920 0.3802 MAIQVASPSSHSFTSEAKYRYDVFLSFRGEDTRHIFTVPLYDALHRKGINAFIDDKKLGKGEKISPSLLKAIERSRISIIVFSKNYATSTWCLEELAHIVWCKEEKNQLVMPIFYKVDPMDVQYQRNSFEEAMAVLGERFRDDTEKVRKWRSALFEAASLSSAWLLKDGYQDGFIESIVEDAYARLPPKRYHNVDYIVGLEPCIEEVMSLLDESDENRVCMLGIYGIGGIGKTTLAKAVYNSVFYNFEGACFLFDVREISKKYQGVVSLQRTLLSEILDENKIKFCSVDEGISKIKHRLSRKKILLVLDDVEEVEQLEQLAGGCDWFGGGSKIIITTRNKQLLIACNITKTYEMKELNERYSLELFCCHAFRKSQPPKVYKSMSIGITHYVRGLPLALKLIGSNLAHKDLEEWRYTLTQYYKISRTTIYEILKVSYDCLQDDAKRVFLDIACFFKTETLELVEEILGACYYGTRFYIEVLVDKSLITIADNGLLLMHDLIQQMGKKIVEQEAPSNPGRRSRLWYYKDVLNVLRKDLGENDIEGIILDPPEQEEVKWNGLAFEKMDNLRILIVRNTQFLTSPKYLPNSLILLDWEGYPSMTLPPDFSPPKLVCFKLCRSLFRFEAPFQNHQLFHDPKEIC 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00005 639 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pral2435g00005 639 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 186 - -
Pral2435g00005 639 Gene3D - 356 441 IPR042197 -
Pral2435g00005 639 ProSitePatterns Zinc finger C2H2 type domain signature. 612 633 IPR013087 -
Pral2435g00005 639 SUPERFAMILY "Winged helix" DNA-binding domain 427 532 IPR036390 -
Pral2435g00005 639 Pfam TIR domain 21 167 IPR000157 GO:0007165
Pral2435g00005 639 Gene3D - 189 351 IPR027417 -
Pral2435g00005 639 SMART till_3 20 160 IPR000157 GO:0007165
Pral2435g00005 639 Gene3D - 15 188 IPR035897 -
Pral2435g00005 639 Pfam NB-ARC domain 203 421 IPR002182 GO:0043531
Pral2435g00005 639 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 618 IPR044974 GO:0006952
Pral2435g00005 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
Pral2435g00005 639 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Pral2435g00005 639 PRINTS Disease resistance protein signature 298 312 - -
Pral2435g00005 639 PRINTS Disease resistance protein signature 221 236 - -
Pral2435g00005 639 PRINTS Disease resistance protein signature 391 405 - -
Pral2435g00005 639 PRINTS Disease resistance protein signature 562 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00005 Pral-Chr2435 43491 46198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00005 21 618 WRKY Transcription Factor Family AT4G12020 32.184 1.05e-70 248