Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2435g00004 ATGGCGACTCAAGTTGAAACAACATCATCCTTTGGCTCCAATAACAAAACCAAGTATAGATATGATGTTTTTCTGAGTTTTAGAGGTGAAGATACTCGCCGCACCTTCACTGTGCCTTTCTACAATGCTTTGCGATGTAAGGGAATCAATGCCTTCATTGACGACAGGAAACTTGGCAAAGGGGAAGAGATCTCACCTACGCTTCTTAGAGCCATTGAGAGATCGAGAATTTCCTTCATTGTGTTCTCTAGGAACTATGCTACTTCCACATGGTGCCTAGAGGAACTCGCCCATATCATTTGGTGTCAGAAGCAGAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAAAAATAGCTTTCAGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGAGATGACTTGGAGAAAGTGCGCAAATGGAGATCTGCTTTGTTTGAAGCTGCTAGCTTATCACCAGCATGGCTTTTCGAAGAAGATGGATACGACGAAGGTGGATTTATTGAAGGTATTGCTGAAGATGCATACGCTAGGCTACCTCCTAAACGCTTCCATGACGTTGATTACATCGTTGGACTTGAGCCTTGTATAGAAGAAGTCATGTCACTTTTGGATGAGTCTGATAATAGTGTTTCTATGTTGGGGATTCATGGAGCTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCCATCTATAACTCAATCTTCTTCTATTTTGAAGGTGCTTGTTTTTTATTTGATGTCAGAGAAGCGTCAAAGAAATATCAGGGTGTTGTCCGCCTTCAACAAACACTTCTATCAGAAGTTCTTGAGGAAAAGAAGATGAAGTTTGGTAGTGTTGATGAAGGAATATCAAAAATAAAGCATAGACTCTCTCACAAAAAGATTTTGTTGATTCTTGATGACGTTGAAGAAGTTGAACAGTTAGAACAACTTGCAGGAGGGGCTGATTGGTTTGTTTGTGGAAGCAAGATCATCATAACAACAAGAAACAAGCAATTGCTAGTTGCACACGATCTTAAAAAAACATATGAAATGAAAGAGCTGAATGAGCATGACTCTCTTAAACTGTTTTGTTGGCATGCCTTTCGAATGAGCCACCCTCCAAAAAGCTACAAAAGTATGTCAATTGGTGTTACAGATTATGTACGTGGCCTTCCTTTGGCCTTAAAATTGATAGGCTCCAATTTGAGACGTAGAAAATTAGCGGAATGGAGATATACACTACAACAATATAACCAAATCACTGGAAGAACAATACATGAGATATTGAAAATAAGCTGTGATTGCTTACAAGAGGGTGCTAAGCGTATTTTTCTGGACATTGCTTTTTTCTTTAAAGAGGAGAATTTGGAATATGTTGAAGACATACTAGGAGCTTGTAATTACGGGCCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTAATAAGTGTTGCTGATAATGGTCGCTTGCACATGCATGATCTAATACAACAAATGGCTAGAGAGATTGTTAAGCAAGAGGAATACGGCCTCACACACTATGCAACTTGGTCCGCCGCGGATTACTGA 1584 0.3996 MATQVETTSSFGSNNKTKYRYDVFLSFRGEDTRRTFTVPFYNALRCKGINAFIDDRKLGKGEEISPTLLRAIERSRISFIVFSRNYATSTWCLEELAHIIWCQKQKNQLVMPIFYKVDPLDVQYQKNSFQEAMAALEDRFRDDLEKVRKWRSALFEAASLSPAWLFEEDGYDEGGFIEGIAEDAYARLPPKRFHDVDYIVGLEPCIEEVMSLLDESDNSVSMLGIHGAGGIGKTTLAKAIYNSIFFYFEGACFLFDVREASKKYQGVVRLQQTLLSEVLEEKKMKFGSVDEGISKIKHRLSHKKILLILDDVEEVEQLEQLAGGADWFVCGSKIIITTRNKQLLVAHDLKKTYEMKELNEHDSLKLFCWHAFRMSHPPKSYKSMSIGVTDYVRGLPLALKLIGSNLRRRKLAEWRYTLQQYNQITGRTIHEILKISCDCLQEGAKRIFLDIAFFFKEENLEYVEDILGACNYGPRFYIEVLVDKSLISVADNGRLHMHDLIQQMAREIVKQEEYGLTHYATWSAADY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2435g00004 527 Gene3D - 357 441 IPR042197 -
Pral2435g00004 527 SUPERFAMILY "Winged helix" DNA-binding domain 428 513 IPR036390 -
Pral2435g00004 527 SMART till_3 20 160 IPR000157 GO:0007165
Pral2435g00004 527 Gene3D - 14 191 IPR035897 -
Pral2435g00004 527 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 188 - -
Pral2435g00004 527 Pfam NB-ARC domain 205 424 IPR002182 GO:0043531
Pral2435g00004 527 PRINTS Disease resistance protein signature 299 313 - -
Pral2435g00004 527 PRINTS Disease resistance protein signature 222 237 - -
Pral2435g00004 527 PRINTS Disease resistance protein signature 392 406 - -
Pral2435g00004 527 Pfam TIR domain 21 184 IPR000157 GO:0007165
Pral2435g00004 527 Gene3D - 192 353 IPR027417 -
Pral2435g00004 527 ProSiteProfiles TIR domain profile. 19 188 IPR000157 GO:0007165
Pral2435g00004 527 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 515 IPR044974 GO:0006952
Pral2435g00004 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 451 IPR027417 -
Pral2435g00004 527 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2435g00004 Pral-Chr2435 37270 43253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2435g00004 71 512 WRKY Transcription Factor Family AT4G12020 30.700 1.90e-48 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2435g00004 - - pcin:129296950 758.829