Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2434g00001 ATGAGCATCGTCTTTTATTTCTATCTGCGCCGAAAGAAGAATCGTCATGCCAAATCAGACAAACAATCTCAGAGTCGGACCATATCTTCCGATTCCTCTTTAAAGGGCGCTGAGAAAGGAAGTAAATACTTTGGAGTCCACCTCTTCACATATAGCGAACTTGAAGAGGCCACTAACAACTTTGATTCAGCCAATGAACTTGGAGATGGGGGTTTTGGAACAGTTTATTGTGGAAAACTAGGGGATGGTCGTACAGTTGCAGTGAAGAGACTGTATGAAAACAATGACAGGAGAGTTGAGCAGTTCATGAATGAAGTGGAGATCTTAACTCGTCTGCGCCACCAAAACCTCGTCCAACTTTATGGCTGCACTTCTCGCCATAGCCGTGAACTTCTGCTTGTGTATGAATACGTTCCTAATGGAACTGTTGCCGATCATCTTCATGGCGAAAGGGCAAAACCAGCAGACACACTTCCGTGGCATACCAGAATGAACATAGCCATAGAGACTGCAAGCGCATTGGCATATCTTCACGCATCTGACATCATCCATCGTGATATAAAAACCACCAACATCCTTCTCGACAGTCATTTCGTTGTCAAAGTAGCAGATTTTGGACTGTCTCGTCTCTTCCCGAATGATGTTACTCACATTTCAACGGCGCCGCAGGGAACTCCTGGATACGTGGATCCGGAGTACCACCAATGCTACCAGCTTACTGATAAGAGTGATGTGTATAGCTTTGGAGTGGTGCTCATTGAGTTGATATCATCAATGCCTGCTATTGATATCACGAGGCATAGGCATGAGGTCAATTTGGCAATCATGGCTGTTCACAAGATTCAAAACGGGGATTTGCATGAGCTTGTGGACCCAGCTCTTGGGTTTGAAGCAGATCCCAAGGTGAGGAAGATGGTTAATGGAGTGGCAGAGTTGGCTTTCCAGTGCTTGCAGAGTATGAAAGATACGAGGCCTTCCATGGAAGAGGTGGTGGAGAGGTTGAAGGAAATACAGAGTGATGGGGTAGGCAAGACCAAAGAAGAGGCGGCGATGGATATCTCAGCAGATCATGTCATGTTGCTGAGGCATGAAGCGCCTCCACTATCACCTGATTCAAATATGAGGAGCACAGGGACGACTCCAAATGCCAGCGGATAA 1158 0.4629 MSIVFYFYLRRKKNRHAKSDKQSQSRTISSDSSLKGAEKGSKYFGVHLFTYSELEEATNNFDSANELGDGGFGTVYCGKLGDGRTVAVKRLYENNDRRVEQFMNEVEILTRLRHQNLVQLYGCTSRHSRELLLVYEYVPNGTVADHLHGERAKPADTLPWHTRMNIAIETASALAYLHASDIIHRDIKTTNILLDSHFVVKVADFGLSRLFPNDVTHISTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAIDITRHRHEVNLAIMAVHKIQNGDLHELVDPALGFEADPKVRKMVNGVAELAFQCLQSMKDTRPSMEEVVERLKEIQSDGVGKTKEEAAMDISADHVMLLRHEAPPLSPDSNMRSTGTTPNASG 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2434g00001 385 MobiDBLite consensus disorder prediction 365 385 - -
Pral2434g00001 385 CDD STKc_IRAK 67 337 - -
Pral2434g00001 385 Pfam Protein kinase domain 63 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2434g00001 385 MobiDBLite consensus disorder prediction 16 36 - -
Pral2434g00001 385 Gene3D Transferase(Phosphotransferase) domain 1 138 358 - -
Pral2434g00001 385 FunFam Wall-associated receptor kinase-like 20 138 347 - -
Pral2434g00001 385 SMART serkin_6 61 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2434g00001 385 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 33 137 - -
Pral2434g00001 385 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 382 IPR044652 GO:0004672
Pral2434g00001 385 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Pral2434g00001 385 Gene3D Phosphorylase Kinase; domain 1 34 137 - -
Pral2434g00001 385 MobiDBLite consensus disorder prediction 370 385 - -
Pral2434g00001 385 ProSiteProfiles Protein kinase domain profile. 61 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2434g00001 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Pral2434g00001 385 SUPERFAMILY Protein kinase-like (PK-like) 41 334 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2434g00001 Pral-Chr2434 3046 5644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2434g00001 28 385 Receptor kinase-like Gene Family AT1G25390 60.976 2.42e-151 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral2434g00001 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2434g00001 - - qsa:O6P43_008550 565.459