Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2431g00004 ATGGACTCTGCATCCAGTCTTCTCCTAAAACCCATTTTCTTGCATTTGTTGTCTGCTTCTCTCCACCTAGTTTTGTTAGTAGCGTTCTTCGTTTCATGGGTGTGGAATAAAATTGTTGTGGGTGCTAGAGATGGTTCCAAGGAGAAACTCAGGGGTACTCTATATCCAAGGGCTCTGTTTTGTTCTTTGGGTGCTTCTGCATTTAATCTTGTCATGTGTCTACTGTGTTACTTCTATTGGTATAGAAATGGTTGGTCTGATGAAAAGTTCGTGACCCTGTTGGATTTGGCGCTTAAAACAGTTGCTTGGGGTGTTGTTTTTGCTTACTTGCGTACAGGATTCTTCAATTCAGGTGAAAGGAAATTTCCGTTCTTCTTCAGAACTTGGTGCGCTTTCTACCTCCTTATTTCTTGTTATAGCTTTATACTGGACGTTATTCTCCAACTTAAACACGTCTTGCTGCCGCTTCAATACTCAATTTCTGATGCTGTCTCCTCCTTTGTGAGTATATTCTTCTGTTACGTGGTGTTTTATGTGAAAAATGAGAGTGAAGATAACACTCTTCAGGAGCCTCTTTTGCTTAACAATGCTGATTTAAGTAATGCGTTAGAGTCAAATAAGACCAAGGGGGAGGAAACTGTTACTCCCTACTCAAATGCTGGCCTTTTCAGCATTCTTACGTTCTCCTGGGTGGGTCCTCTGATTGCTACGGGCAAGCAGAAAACTTTAGATCTTGAGGATGTGCCGCAACTAGCTGGTTGTGACAGTGTAGCTGGAGCTTTTCCACCTTTTAGAAATAAACTTGAGGCTGACTGTGATACAATAAATGGAGTGACCACACTTAAGTTGGTGAAGTCATTAATATTCTCAGCTTGGAAAGAGATTTTTGCAACAGCCATTCTTGCACTTTTAAACACTTTGGCTTCTTACGTTGGTCCATATCTTATTGACACTTTTGTTCAGTACCTCAATGGTAAACAAACATTTAAGAATGAGGGATATGTTTTGGTGGCTACATTTTTTGTTGCGAAGATTATAGAATGTCTATCACAAAGGCACTGGTTCTTTATATTGCAACAAATTGGAATTAGGATCCGAGCACAGCTGGTGACAGTGATTTATAGTAAAAGCTTGACCCTTTCCTGTCAAGCCAAGCAGAGTCACACTACTGGAGAAATAATCAATTTTATGACTGTTGATGCTGAGAGAGTCGGTGATTTCAGTTGGTACATTCATGATCTGTGGATGGTATTTTTGCAAGTAGCGTTGGCCTTGTTTATTTTGTACAAGAATCTTGGGATGGCTTCAATTGCCGCATTGATTGCTACTGTTATTATAATGTTGGCAAATATTCCCTTGGGCTCACTGCAGGAAAAGTTTCAAGACAAGTTAATGGAGTCAAAGGATAGACGAATGAAGGCCACATCTGAGATTTTAAGGAACATGAGAATTCTCAAACTACAGGGATGGGAAATGAAGTTTTTGTCTAAGGTTATTGAACTAAGGAAGATAGAAGAAGGTTGGCTAAGGAAATTTTTTTACACATCAGCCATCACCACCTTTGTGTTCTGGGGTGCACCAACATTTGTATCTGTGGCTACCTTTGGTTCTTGTGCACTTCTGGGGATCCCACTTGAATCGGGGAAAATCTTATCTGCACTTGCAACATTTCGAATTCTTCAAGAGCCCATTTATAACCTTCCAGACACAATTTCAATGATAGCACAAACTAAAGTATCTTTAGATAGGATTGCATCATTCCTTCGACTTGATGATTTACAGTCTGATGTTATAGATAAGCTTCCAAAGGGTAGTTCTAATACAGCAATTGAAGTAGTTAATGGCAATTTCTCGTGGGATTTATCTTCCTCTAATACAACATTGAAAGGTATAAATCTCACGGTCATGCAGGGCATGAGGGTTGCTGTCTGTGGTACTGTTGGCTCAGGCAAGTCCAGTCTACTATCATGTATTTTGGGAGAAGTGCCAAAAATATCAGGAACAATAAGGGTGTGTGGAACTAAGGCCTTTGTTTCTCAGTCTCCATGGATTCAAAGTGGCAAGATTGAAGAGAATATATTATTTGGTAAGGAGATGGATAGAGAAAGGTATGAGAAGGTCCTTCAAGCATGTTCCCTAAAGAAGGACCTAGAGATTCTGCCATTTGGTGATCAGACAATTATTGGAGAGAGGGGAATCAATTTGAGTGGTGGACAAAAACAGAGAATTCAGATTGCACGAGCTCTCTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCGCACCTTTTTAAGGAATGCTTACTAGGTTTTTTAAGTTCCAAGACAGTTATTTATATCACTCATCAAGTAGAGTTCTTACCTGCTGCCAACCTTATTTTGGTCATGAAAGATGGGGAAATTACTCAGTGTGGAAAGTATAATGATTTGCTCAACTTAGGGACTGACTTTATGGAGCTTGTTGGGGCACATAAAAAAGCGTTATCTGCACTTAATTCATTGGATGGGGGGGAAGAGTCTGATAAAGTAAGTATAGCTGATCAAGAGATAAATATCTCTGGTGTACAAGTTACAGAGGAAAAAGAGACAAACAGTGATAGGCAGAGTGATAAAACAGATAATGTAGTTGAACCAAAAGGCCAGCTTATTCAAGAGGAAGAAAGGGAGAAAGGTAAAGTTGGGCTTTCTGTCTACTGGAAATATATTACTACAGCATATGGAGGAGCTCTTGTACCAATTATATTGTTGGCACAAATTCTATTTCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCCGTCTCTTCAGATCTGAAACCACCTGTTGGAACCTTTATGCTTATAGTTGTCTATGTTGCTATGGCCATAGGAAGTGCTTTTTGTATCCTTGTTAGAGCAATTTTTCTATTCACAGCTGGTTACAAGACTGCAACTCTGCTCTTCAATAAAATGCACTTGTGCATCTTCCGTGCACCTATGCCATTTTTTGATGCCACTCCAAGTGGAAGGATTATTAACAGAGCCTCTACAGATCAAAGTGCAGTTGATTTAAACATTCCCTATCAAATTGGGTCATTTGCCTTCTCCATGATCCAACTTTTTGGAATAATAGCAGTGATGTCTCAGGCTGCATGGCAGGTTTTCATCATCTTTATACCTGTGATATCAATCAGCATTTGGTATCAGCAATATTATCTACCTTCAGCTCGAGAGCTATCACGGTTAATTGGAGTGTGCAAAGCTCCAGTCATTCAGCACTTTGCTGAAACTATTTCAGGGACAACAACTATCAGGAGCTTTGATCAAGAGTCAAGATTTAAGGAAACAAATATGAAACTGATGGATGGGTATTCTCGGCCAAAATTTAACAGTGCTGCTGCTATGGAATGGCTTTGCTTCCGCTTGGATATGTTGTCTTCCATCACATTTGTCTTTTCCTTAATATTCTTGATATTTATGCCACGGGGAGTCATAGATCCAGGTATTGCTGGTTTGGCTGTTACGTATGGACTTAATCTAAACATGTTACAAGCCTGGGTGATATGGAATCTTTGCAACTTGGAGAATAAAATTATATCAGTAGAGAGAATACTTCAGTATAGTAGCATTCCAAGTGAGCCCCCTCTTGTGATAGAAGAAAATAGACCCAATCTTTCTTGGCCAATGCATGGGGAAGTTGACATTTGTGATCTACAGGTTCGCTATGCTCCACATCTTCCGCTTGTGTTGCGTGGCATAACGTGCAAATTCCCTGGTGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAAACAACTCTCATACAAGCACTTTTTCGAATCATTGAGCCAGCTATTGGGCAAATTGTGATTGATGGCATCAACATTTCATCAATTGGACTTCATGATTTGAGGTCTAGACTTAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGTACAGTGAGAAGTAACTTAGACCCATTGGAAGAGTACACAGATGAGCAAATTTGGGAGGCTCTAGATAAGTGTCAACTTGGAGATGACGTTCGAAAGAAAGATGGAAAGCTAGACTCTGCAGTTAGTGAAAACGGTGAGAATTGGAGCATGGGTCAGAGGCAATTGGTGTGCCTTGGTAGGGTGCTACTTAAGAGAAGTAAGGTGTTGGTGCTTGATGAGGCCACCGCGTCGGTTGATACCGCCACAGATAACCTAATTCAGCAAACTCTTCGGCAACATTTCTCTAACTGTACAGTCATTACCATTGCACATAGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTTCTCAATCAAGGACTGATTGAGGAGTTTGACTCTCCAACAAGATTGCTTGAGGACAAATCATCTTCTTTTGCTGAGCTTGTTGCTGAGTATACCATGAGATCCAAGTCTTCCTACCAGTAA 4458 0.4024 MDSASSLLLKPIFLHLLSASLHLVLLVAFFVSWVWNKIVVGARDGSKEKLRGTLYPRALFCSLGASAFNLVMCLLCYFYWYRNGWSDEKFVTLLDLALKTVAWGVVFAYLRTGFFNSGERKFPFFFRTWCAFYLLISCYSFILDVILQLKHVLLPLQYSISDAVSSFVSIFFCYVVFYVKNESEDNTLQEPLLLNNADLSNALESNKTKGEETVTPYSNAGLFSILTFSWVGPLIATGKQKTLDLEDVPQLAGCDSVAGAFPPFRNKLEADCDTINGVTTLKLVKSLIFSAWKEIFATAILALLNTLASYVGPYLIDTFVQYLNGKQTFKNEGYVLVATFFVAKIIECLSQRHWFFILQQIGIRIRAQLVTVIYSKSLTLSCQAKQSHTTGEIINFMTVDAERVGDFSWYIHDLWMVFLQVALALFILYKNLGMASIAALIATVIIMLANIPLGSLQEKFQDKLMESKDRRMKATSEILRNMRILKLQGWEMKFLSKVIELRKIEEGWLRKFFYTSAITTFVFWGAPTFVSVATFGSCALLGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLQSDVIDKLPKGSSNTAIEVVNGNFSWDLSSSNTTLKGINLTVMQGMRVAVCGTVGSGKSSLLSCILGEVPKISGTIRVCGTKAFVSQSPWIQSGKIEENILFGKEMDRERYEKVLQACSLKKDLEILPFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGFLSSKTVIYITHQVEFLPAANLILVMKDGEITQCGKYNDLLNLGTDFMELVGAHKKALSALNSLDGGEESDKVSIADQEINISGVQVTEEKETNSDRQSDKTDNVVEPKGQLIQEEEREKGKVGLSVYWKYITTAYGGALVPIILLAQILFQVLQIGSNYWMAWATPVSSDLKPPVGTFMLIVVYVAMAIGSAFCILVRAIFLFTAGYKTATLLFNKMHLCIFRAPMPFFDATPSGRIINRASTDQSAVDLNIPYQIGSFAFSMIQLFGIIAVMSQAAWQVFIIFIPVISISIWYQQYYLPSARELSRLIGVCKAPVIQHFAETISGTTTIRSFDQESRFKETNMKLMDGYSRPKFNSAAAMEWLCFRLDMLSSITFVFSLIFLIFMPRGVIDPGIAGLAVTYGLNLNMLQAWVIWNLCNLENKIISVERILQYSSIPSEPPLVIEENRPNLSWPMHGEVDICDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKTTLIQALFRIIEPAIGQIVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDDVRKKDGKLDSAVSENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQQTLRQHFSNCTVITIAHRITSVLDSDMVLLLNQGLIEEFDSPTRLLEDKSSSFAELVAEYTMRSKSSYQ 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2431g00004 1485 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 217 1474 - -
Pral2431g00004 1485 CDD ABCC_MRP_domain1 610 810 - -
Pral2431g00004 1485 Gene3D ABC transporter type 1, transmembrane domain 884 1221 IPR036640 GO:0005524|GO:0016020
Pral2431g00004 1485 Gene3D ABC transporter type 1, transmembrane domain 272 590 IPR036640 GO:0005524|GO:0016020
Pral2431g00004 1485 Pfam ABC transporter 1257 1405 IPR003439 GO:0005524
Pral2431g00004 1485 SUPERFAMILY ABC transporter transmembrane region 286 589 IPR036640 GO:0005524|GO:0016020
Pral2431g00004 1485 FunFam ABC transporter C family member 10 279 592 - -
Pral2431g00004 1485 CDD ABCC_MRP_domain2 1238 1458 - -
Pral2431g00004 1485 MobiDBLite consensus disorder prediction 866 890 - -
Pral2431g00004 1485 FunFam ABC transporter C family member 5 595 842 - -
Pral2431g00004 1485 Gene3D - 1223 1476 IPR027417 -
Pral2431g00004 1485 MobiDBLite consensus disorder prediction 870 890 - -
Pral2431g00004 1485 SMART AAA_5 1266 1451 IPR003593 GO:0016887
Pral2431g00004 1485 SMART AAA_5 637 810 IPR003593 GO:0016887
Pral2431g00004 1485 SUPERFAMILY ABC transporter transmembrane region 921 1221 IPR036640 GO:0005524|GO:0016020
Pral2431g00004 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 296 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2431g00004 1485 FunFam ABC transporter C family member 3 1223 1475 - -
Pral2431g00004 1485 Pfam ABC transporter transmembrane region 296 562 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2431g00004 1485 Pfam ABC transporter transmembrane region 923 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2431g00004 1485 ProSitePatterns ABC transporters family signature. 735 749 IPR017871 GO:0005524|GO:0016887
Pral2431g00004 1485 CDD ABC_6TM_ABCC_D2 921 1215 IPR044726 GO:0140359
Pral2431g00004 1485 Pfam ABC transporter 628 762 IPR003439 GO:0005524
Pral2431g00004 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1471 IPR027417 -
Pral2431g00004 1485 FunFam ABC transporter C family member 5 885 1221 - -
Pral2431g00004 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 607 832 IPR027417 -
Pral2431g00004 1485 Gene3D - 591 846 IPR027417 -
Pral2431g00004 1485 CDD ABC_6TM_ABCC_D1 298 584 IPR044746 GO:0140359
Pral2431g00004 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 610 833 IPR003439 GO:0005524
Pral2431g00004 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2431g00004 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1474 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2431g00004 Pral-Chr2431 170163 176335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2431g00004 610 839 Calmodulin-binding Proteins AT2G36910 31.200 1.93e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2431g00004 - K05666 qsa:O6P43_013598 2347.78