Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00045 ATGTCACTTCTCAGCAGATTCTTTTACAGGAGACCCCCCGATGGTTTGCTGGAATTTGTCGATAGAGTATACGTCTTCGATTCATGCTTTTCCACTGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATTACCGAGTTACATGAAGAATTCCCGGACTCTTCCTTTTTCGCTTTTAATTTTCGTGAGGGGGAGAAACGGAGTCAATTTGCTGAAATTCTTTGTGAATACGATGTTACTGTGATGGATTATCCGCGACAATATGAGGGTTGCCCTATTCTTCCAGTGTCTTTGCTTCAACATTTTCTCCGTGTTTGTGAGAGTTGGCTTTCACTTGGGCATCAACAGAATGTCATCCTTCTCCATTGTGAGAGGGGAGGTTGGCCTCTCTTGGGATTTCTTTTAGCTAGCTTTCTAATTTATAGAAGACTACACAGCGGTGAACGGAAGACGCTTGAAATGGTGCACAGAGAGGCACCCAAAGGTTTCTTACAGCTGTTGTCGCCTTTGAACCCGTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCGCCGCCCGAGAGAGCTCTTTCTCTAGATTGTGTCATTCTCAGAGCCATTCCTAGTTTTGATTCCCAGAACGGATGCAGACCCGTGATCCGCATTTTTGGTAGAAATTTTCTCAGCAAGGGTGGGCTTTCTACTCAGATGCTCTACTCCATGCACAAGAAAAAGAAAACTTTAAGGCACTACCGTCAGGCAGACTGTGATGTGATCAAGATTGACATACAGTGTTTAGTACAAGGAGATGTGGTATTGGAGTGCGCCCATTTGGACTTGGATCCCGAAAGGGAAGTAATGATGTTTCGCATAATGTTCAACACAGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTACCCAAAAGGCTTCCGAGCTGAGGTTTTGTTTGGGGAGATTGAAAGCATATCTCCTCCAAAAGCCCCAACCACTGTGTTAAATGGTGAGGAGAAAGGCGGATTGCCCATTGAAGCATTTTCAAGGGTTCAAGAACTTTTTAGTGGCGTCGAGTGGCTTGACAGTGGTGAAGATGCTGCAGTCTGGTTGCTTAAACAACTTTCTGTGTTGAATGATGTCAAAGAGCTTTCAAGGTTGCAAGGTAAAACAAGTTGGTACTCGTCACCTGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAAGCCTTTGATGTTATTCCAAAGTCTTTTACTGATATTTCCAAACTATTGACGCCTGACAACCCTGATTCAATCCATTTAGATTTTGAAAATGATGGTAGGAAAGATATACATCTTACTTCAGAACCTTCAGATCCATCGATTGAAAGTGTTTCAGTGTCTCATCATGCTCACAGTTCATCTCCACCGTCAGCTCCTCCACTTTGTCCGTCTCTTTCTAATATCAGTGGAGATCCTTGCATATCTCCTATAGCATCATTAGCAAATTGCCAGATCCCAATACCGCCCCCTCCACCACCTCCTCCGCCTTCACCTCCATCTGCCTCTTGCAAAACTTTGCTACCACCCCCACTAAGCCCTTATCAATCCACTTCTAATCAACAAACATTGCCACCTCCCCTACCCGTGCTGGGGAGTGAAATGAATGAGGTGCCACAACAATCATCACAACCACCGCCACCGCCACCGCCTCCGCCTCCGCCTCCACCACCAATGCCACCTGCACTATCAAATAGTTTAATTTCATCTAATGCTAAGCCTCTCCAAGTAGCAAGACCTCCACCACCACCTCCTCCTCCTCCTCCCACCTATCCCACACCAACTCATACACCTAAACCACCTCCACCTCCTTTTACAGTAAAGCCCTCAAATGCTTCTCTTCCACCGCTAGCGCCTAGTCAAGGCACAATACCACCTCCACCTCCCCCACCACCACTTAGTCGAGCTGCACCCCTACCCCCACCCCCACCACCTAGTCGAGGTACAATGCCGCCTCTGCCTCCGCCTCCACCTCCACCACCTCCACCGCTTGGTCGAGGCACAACGCCATCTCCACCTCCTCCTCCACCACCACCGCCGCCACTACCTGGTCGAGGTGAAACACCGGCTCCGCCTCCACCACCACCTAGCCAAGGTGCAGTGCCTCCTCCGCCTCCTCCACCGCCCCCACCTGGTCGTGACACAAAGCCACCTGTACCGCCATTGCCTAGTCAAGGTGCAGCACCGCCTCCACCTCCTCCACCACCACTTGCTCGAGGTGCAGCACCACCTCCACCTCCTCCACCACCACTTGCTCGAGGTGCAGCACCACCTCCACCTCCTCCACCACCACTTGCTCGAGGTGCAGCACCACCCCCACCTCCACCACCTAGTCGGGCTGTAGTGCCTCCACTACTTGGTCGAGGTGCAACACCACCTCCACCTCCACTACCTGGTCGAGGTGCACCACCACCTCCTCCCCCTGTTGCAGCAAGGGGATCTGGTGTTCCGCCACCACCCCCATCCATTGCCAAAGGCAAGCCTTTAACATCAAATCTTGGAAGAGGTCGAGGTTCTAGTGGGACTGCTATTGCCCCTAAGAAAGCATCGTTAAAGCCCCTACATTGGGTGAAAGTTACACGAGCAATGCAAGGAAGTCTATGGGCTGATTCATCAAAACAGGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGAGTCTGTTTTCAGCAGCGTCTGCTTCTGATGTCAGCAGTACTAAAGGTGCCGGTCGGCGTGGTTCTAATATCAATAAACCTGAGAAAGTTCAACTGATTGACTTGCGAAGAGCATATAATTGTGAGATAATGCTCTCTAAAATCAAAATTCCCTTGCCAGACATGCTTAATGCAGTTCTGGCATTGGATTCATCTGCTTTAGACATCGATCAGGTTGAGAATCTTATTAAGTTCTGTCCCACAAAGGAAGAGATGGAAATGTTGAAGAATTACACTGGGAACAAGGAAATGCTTGGAAAGTGTGAGCAGTTTTTCATGGAGTTGATGAAGGTTCCACGAGTAGAAGCTAAATTACGAGTTTTTGCTTTTAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATTAAATTTGAACACAATCAATGATGCTGCCAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCTGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGGAATAACAAGATGACTTTGATGCATTATTTGTGTAAGCTTCTTTCTGAGAAAATGCCAGAATTGCTAGATTTTGGCAAGGATCTTGTTCACTTGGAAGCAGCTTCGAAGATCCAACTAAAAGCATTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAGCTTGCTGCTTCAGAAAATGATGGTGTTATATCTGCAGGCTTCCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAGGCTGAAGTGAGGTTACTGATATCATTGTATTCTGAAGTTGGAAGAAATGCAGATTCTTTGTCCCAGTATTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATCCTAGTTGTCTTCGTGAAGATGTTTAACAAATCAAGGGAGGAGAACGAAAGGCAGGCAGATGCCGAAAAGAAGAAACTGGAGAAAGAAGCCATGAAGGAACAGCGAACACCTGTAAATACAAATTTGAAAAAAGATGTTCACTAG 3876 0.467 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLLQHFLRVCESWLSLGHQQNVILLHCERGGWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPVIRIFGRNFLSKGGLSTQMLYSMHKKKKTLRHYRQADCDVIKIDIQCLVQGDVVLECAHLDLDPEREVMMFRIMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEIESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKTSWYSSPADSEDENNESSTADSSDEAFDVIPKSFTDISKLLTPDNPDSIHLDFENDGRKDIHLTSEPSDPSIESVSVSHHAHSSSPPSAPPLCPSLSNISGDPCISPIASLANCQIPIPPPPPPPPPSPPSASCKTLLPPPLSPYQSTSNQQTLPPPLPVLGSEMNEVPQQSSQPPPPPPPPPPPPPPMPPALSNSLISSNAKPLQVARPPPPPPPPPPTYPTPTHTPKPPPPPFTVKPSNASLPPLAPSQGTIPPPPPPPPLSRAAPLPPPPPPSRGTMPPLPPPPPPPPPPLGRGTTPSPPPPPPPPPPLPGRGETPAPPPPPPSQGAVPPPPPPPPPPGRDTKPPVPPLPSQGAAPPPPPPPPLARGAAPPPPPPPPLARGAAPPPPPPPPLARGAAPPPPPPPSRAVVPPLLGRGATPPPPPLPGRGAPPPPPPVAARGSGVPPPPPSIAKGKPLTSNLGRGRGSSGTAIAPKKASLKPLHWVKVTRAMQGSLWADSSKQDNQSRPPEIDISELESLFSAASASDVSSTKGAGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSALDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSSQVNDLRLNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELLDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGVISAGFRKVLKNFLDIAEAEVRLLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEAMKEQRTPVNTNLKKDVH 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 613 647 - -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 407 433 - -
Pral2426g00045 1291 FunFam Formin-like protein 877 1264 - -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 1257 1291 - -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 656 862 - -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 519 884 - -
Pral2426g00045 1291 PANTHER FORMIN-J 794 1279 - -
Pral2426g00045 1291 Coils Coil 1253 1280 - -
Pral2426g00045 1291 Gene3D Formin, FH2 domain 879 1264 IPR042201 -
Pral2426g00045 1291 Gene3D - 197 342 - -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 521 544 - -
Pral2426g00045 1291 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 187 IPR029021 -
Pral2426g00045 1291 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 467 501 - -
Pral2426g00045 1291 Coils Coil 1057 1077 - -
Pral2426g00045 1291 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 578 600 - -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 474 492 - -
Pral2426g00045 1291 Pfam Formin Homology 2 Domain 883 1253 IPR015425 -
Pral2426g00045 1291 SMART PTEN_C2_2 198 338 IPR014020 -
Pral2426g00045 1291 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Pral2426g00045 1291 ProSiteProfiles Formin homology-2 (FH2) domain profile. 878 1278 IPR015425 -
Pral2426g00045 1291 MobiDBLite consensus disorder prediction 547 564 - -
Pral2426g00045 1291 SUPERFAMILY Formin homology 2 domain (FH2 domain) 840 1272 - -
Pral2426g00045 1291 Coils Coil 1159 1186 - -
Pral2426g00045 1291 SMART it6_source 586 1289 IPR015425 -
Pral2426g00045 1291 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00045 Pral-Chr2426 207929 218982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00045 1 471 FH2 protein (formin) Gene Family AT1G31810 73.036 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2426g00045 - - pcin:129311237 987.638