Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00038 ATGTTCGGAGGAGGAGAAGGCGAGGCCTTGGCCCGCTTGGGCATCGTGACGCCGTCCCTCCTTAAACCCGCCACGTCGTCGGTAATTTCCGGTGAGATGTCACCGTCGACGGCAGCTGCGCCGGTGAGGGATGACAGGGTTCCAGCGCAGCCGCAGTGGAGCCAGCAGGAGACGAGGGAGTTCATTGCGATCCGTGCGGAGCTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAGACCCTCTGGGAGGTTGTCAGTGCCAAGATGAGGGAGAGAGGCTTCAGGAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTCGTTAATCGTTATAAGGGGAAAGAGACATCAGATCCCGAGCATGGGAGACAATGCCCCTTTTTTGAAGAATTGCATGCCATCTTTGCTCAAAGAGCACAGAGCATGCGGCGATTACTTCTTGAATCTGAGGCCCGCTCAACTCAGACAAAGAAGGGGATGAAAAGACTTGGAGATCGGTCCTCTGAGGAATTCTCAGAAGATGATGATGAGGTTGAAGATGACAGTGAAGAGGAAAGACCTGTAAGAAGCAACTCTCGCAAAAGGAAAGCAGACAAGGTCGCAATGGAGAAGTCTTCAAGGGCGAACATTGCATCAGATGCTATCAGTAATACTGCCAATAGCATTCAGGATATGCTCAAGGAATTTTTCCAGCAACAGCTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCAAGAAAGACAGCTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATTATTGAGCAGGCATGGAGGGATAGAGAAGAACAGAGAAGAATGAGAGAAGAGAGCCGAGCAGAAAGGAGAGATGTACTGTTGACGACCCTTCTGAACAAGCTCATCCATGAATCTAATTAG 936 0.5064 MFGGGEGEALARLGIVTPSLLKPATSSVISGEMSPSTAAAPVRDDRVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQRAQSMRRLLLESEARSTQTKKGMKRLGDRSSEEFSEDDDEVEDDSEEERPVRSNSRKRKADKVAMEKSSRANIASDAISNTANSIQDMLKEFFQQQLRMEMQWREMMERRAQERQLFEQEWRQSMEKLERERLIIEQAWRDREEQRRMREESRAERRDVLLTTLLNKLIHESN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00038 311 Coils Coil 256 276 - -
Pral2426g00038 311 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
Pral2426g00038 311 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Pral2426g00038 311 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Pral2426g00038 311 MobiDBLite consensus disorder prediction 151 170 - -
Pral2426g00038 311 CDD GT1 51 116 - -
Pral2426g00038 311 Gene3D - 53 114 - -
Pral2426g00038 311 MobiDBLite consensus disorder prediction 151 208 - -
Pral2426g00038 311 MobiDBLite consensus disorder prediction 185 204 - -
Pral2426g00038 311 PANTHER FI21293P1 45 308 - -
Pral2426g00038 311 SMART sant 49 111 IPR001005 -
Pral2426g00038 311 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00038 Pral-Chr2426 165373 167487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00038 34 311 Trihelix Transcription Factor Family AT2G38250 43.463 4.37e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral2426g00038 Myb_DNA-bind_4 9e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2426g00038 - - pcin:129311173 486.878