LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2426g00035	ATGGGCGTTTGTCTGATGAAATGGCAATGGCCATGGCTTCTTTATGTTCTGCTGATATGTCATGTGATCAATCGGAATGAAGCAATTAGTCCTGATGGAGAGGCACTTCTCAGCTTCAGGACGGCAGCTAGCCCCAATAGTGACCTGTTACCTTGGAGGCCTGAGGATCCTGATCCGTGTAAATGGAAAGGAGTAAAATGTGATCCCAAAACCAAGAGAGTGACAAATCTGTTTCTTGATCATTTTAAGTTAAGTGGGTCTATTTCAGCTGACCTTGGGAAGCTAGAGCATCTGAGGATTCTTGCTCTTAACAACAACAACTTATATGGGACTATTCCTTCAGAATTAGGAAACTGCACTGAATTGCAAGAGATATATTTGCATAGTAACTACCTTAGTGGAGTGATCCCCAATGAAATCGGAAATCTTTCACAACTTCAAAATTTGGATATATCAAGTAACTCCCTTAGTGGGAGTATTCCTCCATCACTTGGGAAATTATATACCCTAAAAAATTTCAATGTGTCGTTCAATTTTCTGGTAGGACCGATACCTTTGGATGGTGTGCTTGCCAACTTCACTGAAAGATCCTTTCTTGGAAATCTTGGTTTGTGTGGAGTGCAAATCAATACAGCATGTAAGAATGATGGTTCACCTAATTCCAACCCTCAATCTCCGACATCAGACCAAAATCAAAATGGAAAAAGGAAAGATTCTGGCCGGCTGCTTATTAGTGCACTAGCAACTGTGGGTGCACTACTTTTAGTGGCACTGATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACAGAGAAAGTCTAGCAATGGATGTCTGCGGAGGGGCATCAATTGTGATGTTTCATGGAGATCTCCCATATTCTTCAAAAGATATTATTAAAAAACTAGAGAGTTTAAATGAGGAACACATAATTGGTTGTGGAGGATTTGGAACAGTTTACAGGGTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTAAATGAGGGCTTTGATCGATTTTTTGAGAGAGAGCTTGAAATTCTTGGAAGCATAAAACACAGATATCTTGTGAACCTAAGAGGCTATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTTGATTGGGATTCACGCTTGAATATCATCTTGGGAGCTGCAAAAGGGCTTGCCTACCTGCATCATGATTGTTCGCCTAGGATCATACACCGTGACATAAAATCAAGCAATATTTTGCTTGATGGAAACTTGGATGCTCGAGTCTCTGACTTTGGACTCGCCAAACTTCTGAAGGATGAGGAATCTCACATCACTACCATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAATATATGCTAAGTGGTAGAGCAACTGAAAAGACTGATGTTTATAGTTTCGGTGTCCTGGTACTTGAAGTGTTGAGTGGAAAGCGACCAACAGATGCATCTTTCATTGAGAAGGGCCTCAATATTGTTGGTTGGTTAAATCATTTAATAACGGAGAACAGAGCAAGAGATATAGTTGATCAGCAATGTGAAGGAGTGCAGCTAGAGAGCCTGGATGCGTTGCTTTCTGTAGCTATACTGTGTGTATGCTCGAGTCCGGAGGATCGACCCACAATGCACAGAGTGGTCCAATTGATTGAATCAGAGGTGATGACCCCATGCCCAAGTGACTTTTATGACTCCAACTCTGAATAG	1785	0.409	MGVCLMKWQWPWLLYVLLICHVINRNEAISPDGEALLSFRTAASPNSDLLPWRPEDPDPCKWKGVKCDPKTKRVTNLFLDHFKLSGSISADLGKLEHLRILALNNNNLYGTIPSELGNCTELQEIYLHSNYLSGVIPNEIGNLSQLQNLDISSNSLSGSIPPSLGKLYTLKNFNVSFNFLVGPIPLDGVLANFTERSFLGNLGLCGVQINTACKNDGSPNSNPQSPTSDQNQNGKRKDSGRLLISALATVGALLLVALMCFWGCFLYKKFGKNHRESLAMDVCGGASIVMFHGDLPYSSKDIIKKLESLNEEHIIGCGGFGTVYRVAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLKDEESHITTIVAGTFGYLAPEYMLSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNHLITENRARDIVDQQCEGVQLESLDALLSVAILCVCSSPEDRPTMHRVVQLIESEVMTPCPSDFYDSNSE	594

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2426g00035	594	FunFam	LRR receptor-like serine/threonine-protein kinase FEI 1	283	384	-	-
	Pral2426g00035	594	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	428	440	IPR008271	GO:0004672\|GO:0006468
	Pral2426g00035	594	Pfam	Protein kinase domain	311	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2426g00035	594	Gene3D	Transferase(Phosphotransferase) domain 1	385	583	-	-
	Pral2426g00035	594	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	74	577	-	-
	Pral2426g00035	594	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	29	190	-	-
	Pral2426g00035	594	SMART	serkin_6	309	581	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2426g00035	594	ProSitePatterns	Protein kinases ATP-binding region signature.	315	341	IPR017441	GO:0005524
	Pral2426g00035	594	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	385	587	-	-
	Pral2426g00035	594	SUPERFAMILY	L domain-like	41	196	-	-
	Pral2426g00035	594	MobiDBLite	consensus disorder prediction	216	233	-	-
	Pral2426g00035	594	MobiDBLite	consensus disorder prediction	216	236	-	-
	Pral2426g00035	594	Pfam	Leucine rich repeat N-terminal domain	31	68	IPR013210	-
	Pral2426g00035	594	Pfam	Leucine rich repeat	97	156	IPR001611	GO:0005515
	Pral2426g00035	594	Gene3D	Phosphorylase Kinase; domain 1	285	384	-	-
	Pral2426g00035	594	ProSiteProfiles	Protein kinase domain profile.	309	581	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2426g00035	594	Gene3D	Ribonuclease Inhibitor	30	214	IPR032675	-
	Pral2426g00035	594	SUPERFAMILY	Protein kinase-like (PK-like)	294	576	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2426g00035	Pral-Chr2426	149119	156979	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2426g00035	1	585	Receptor kinase-like Gene Family	AT2G35620	74.232	0.0	856

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XIIIa	Pral2426g00035		Pkinase	3.4e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2426g00035	-		-	gmx:100819230	1005.74