Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00015 ATGGGATCTAGTGGTAGCAAAGGCACTTCCTCTTGCAGTTCGTCGTCATCTTCCGGCAGTTTCCGGAAGGTTCGATCTAAGAAAGGACATAGAGGATTTCAGTCGTATTGTCTGGGAACAACCTCTGGATCTCATGACGCACAGAATAAAACAAATGGCAATGGTGTTACATACAACTGTTACACTGGGACGCGCTCAAATGAGATGAAATCAAAGTCTTTTAGAGATGATAAAAGGAAAACATCTGATGACATGCCTTGCATGCCTTCCAACATTGACCTTAGTGAGTGGGATCAAACAAGCATCTCCAGTAATTCCTCCAGAACTCGTAGCCGATCTACACGTGCTTCTTCAACTGGTGGTCGATTCCTTTCTCGGTTTAGCCTTATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACAACCAGTTTAGGGTCATCAAGGTCCTGCCATGCTTCTTCTACAACTATGTCAATATTCAATAATGAAGATGATCGGAGTCTGCATCCAGGACCCACTGGCAGCTTGGTTAATAGAAATGAAACTCGACAATCAGCAGATTCATCTGGCAACTTGCAGGGTAATCCCTCATCTTCTTCTAGACAGAATGCGGTTAGAGATGGAAATGGTTCATGTGAAGGGCTGGATCTAAACTTGTTTTCTTCAAGAATTCATGCTGAGACTGAAAATATTGAGGGTCGACAAAATGGAGCTCGAGAACCTGTGGAACGGAATTTTCGGTACAGCCGGACTCTAAGTGTTGGGAGGCTTCGTAATAGAGTTCTTCGCCAATCAGCTTTCTCTGATGTCAGCTTTTGCCCCCGGCAACAAGAGAGAGAAGCAAGGGATACTAGGGAGGATAATGAAAGACAAGCGGGGGAGGGAGATTCAAGAGTATTACCATCTTTTAGTAATGCTATAAATTCTTCTTCTATGTCTGGTTATCCTCCATCCAGTATTTCTAACTCCTTATTCAACATCCAAGACTATGAGGTTGAGAATTCGCGGTCAAGAGAAACTAGGTACCAAGATCTGCTGGAACACAGATCCAACTTCCTTGAACGGAGAAGAAGAATAAGATCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTATCTGGACATGACAGATCTTGTATCTTGTCTGGTCAACATAGAAATGGTCATTGTACATGCCGAATTGGTAGTCGTGATACTAGTTCAATTGATGATACCGGTACTAGAGCTAGCATATCAAGAATTGTAATGCTAGCTGAAGCCTTATTTGAGCAATCTGCGGTTTTATCTTCCCGCCCTTCTGTGTCTTCCATTGGATCTGTTCCTGCGCCTAATGATGTTGTGGAGTCTTTGCCGGTCAAAACATACACAAAGTTGCATAAACATCAAGAGGATGCTGCCCAATGCTACATATGCCTGGTGGAGTATGAGGATGGAGACAGCATCCGTGAGCTGCCTTGCCATCACCAATTTCATAGAACATGCATAGACAAGTGGCTTAAGGAAATTCACAGGGTATGTCCACTATGTCGGAGGGACATCTGCATATCTGATTCACTGTCAATGGAGAACTAA 1584 0.4375 MGSSGSKGTSSCSSSSSSGSFRKVRSKKGHRGFQSYCLGTTSGSHDAQNKTNGNGVTYNCYTGTRSNEMKSKSFRDDKRKTSDDMPCMPSNIDLSEWDQTSISSNSSRTRSRSTRASSTGGRFLSRFSLIPGNISFRLSRTTSLGSSRSCHASSTTMSIFNNEDDRSLHPGPTGSLVNRNETRQSADSSGNLQGNPSSSSRQNAVRDGNGSCEGLDLNLFSSRIHAETENIEGRQNGAREPVERNFRYSRTLSVGRLRNRVLRQSAFSDVSFCPRQQEREARDTREDNERQAGEGDSRVLPSFSNAINSSSMSGYPPSSISNSLFNIQDYEVENSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGHCTCRIGSRDTSSIDDTGTRASISRIVMLAEALFEQSAVLSSRPSVSSIGSVPAPNDVVESLPVKTYTKLHKHQEDAAQCYICLVEYEDGDSIRELPCHHQFHRTCIDKWLKEIHRVCPLCRRDICISDSLSMEN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00015 527 MobiDBLite consensus disorder prediction 1 22 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 144 208 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 69 120 - -
Pral2426g00015 527 Pfam Ring finger domain 471 514 IPR001841 -
Pral2426g00015 527 SMART ring_2 472 513 IPR001841 -
Pral2426g00015 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 435 519 IPR013083 -
Pral2426g00015 527 SUPERFAMILY RING/U-box 450 520 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 273 302 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 144 163 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 69 84 - -
Pral2426g00015 527 ProSiteProfiles Zinc finger RING-type profile. 472 514 IPR001841 -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 173 207 - -
Pral2426g00015 527 FunFam Putative RING zinc finger domain superfamily protein 441 519 - -
Pral2426g00015 527 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 526 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 1 30 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 93 120 - -
Pral2426g00015 527 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00015 Pral-Chr2426 98804 104047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00015 72 521 C3H Transcription Factor Family AT5G45290 48.837 2.87e-108 332