Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2426g00014 ATGGGATCTAGTGGTAGCAAAGGCACTTCCTCTTGCAGTTCGTCGTCATCTTCCGGCAGTTTCCGGAAGGTTCGATCTAAGAAAGGACATAGAGGATTTCAGTCGTATTGTCTGGGAACAACCTCTGGATCTCATGACGCACAGAATAAAACAAATGGCAATGGTGTTACATACAACTGTTACACTGGGACGCGCTCAAATGAGATGAAATCAAAGTCTTTTAGAGATGATAAAAGGAAAACATCTGATGACATGCCTTGCATGCCTTCCAACATTGACCTTAGTGAGTGGGATCAAACAAGCATCTCCAGTAATTCCTCCAGAACTCGTAGCCGATCTACACGTGCTTCTTCAACTGGTGGTCGATTCCTTTCTCGGTTTAGCCTTATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACAACCAGTTTAGGGTCATCAAGGTCCTGCCATGCTTCTTCTACAACTATGTCAATATTCAATAATGAAGATGATCGGAGTCTGCATCCAGGACCCACTGGCAGCTTGGTTAATAGAAATGAAACTCGACAATCAGATTCATCTGGCAACTTGCAGGGTAATCCCTCATCTTCTTCTAGACAGAATGCGGTTAGAGATGGAAATGGTTCATGTGAAGGGCTGGATCTAAACTTGTTTTCTTCAAGAATTCATGCTGAGACTGAAAATATTGAGGGTCGACAAAATGGAGCTCGAGAACCTGTGGAACGGAATTTTCGGTACAGCCGGACTCTAAGTGTTGGGAGGCTTCGTAATAGAGTTCTTCGCCAATCAGCTTTCTCTGATGTCAGCTTTTGCCCCCGGCAACAAGAGAGAGAAGCAAGGGATACTAGGGAGGATAATGAAAGACAAGCGGGGGAGGGAGATTCAAGAGTATTACCATCTTTTAGTAATGCTATAAATTCTTCTTCTATGTCTGGTTATCCTCCATCCAGTATTTCTAACTCCTTATTCAACATCCAAGACTATGAGGTTGAGAATTCGCGGTCAAGAGAAACTAGGTACCAAGATCTGCTGGAACACAGATCCAACTTCCTTGAACGGAGAAGAAGAATAAGATCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTATCTGGACATGACAGATCTTGTATCTTGTCTGGTCAACATAGAAATGGTCATTGTACATGCCGAATTGGTAGTCGTGATACTAGTTCAATTGATGATACCGGTACTAGAGCTAGCATATCAAGAATTGTAATGCTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGCGGTTTTATCTTCCCGCCCTTCTGTGTCTTCCATTGGATCTGTTCCTGCGCCTAATGATGTTGTGGAGTCTTTGCCGGTCAAAACATACACAAAGTTGCATAAACATCAAGAGGATGCTGCCCAATGCTACATATGCCTGGTGGAGTATGAGGATGGAGACAGCATCCGTGAGCTGCCTTGCCATCACCAATTTCATAGAACATGCATAGACAAGTGGCTTAAGGAAATTCACAGGGTATGTCCACTATGTCGGAGGGACATCTGCATATCTGATTCACTGTCAATGGAGAACTAA 1602 0.437 MGSSGSKGTSSCSSSSSSGSFRKVRSKKGHRGFQSYCLGTTSGSHDAQNKTNGNGVTYNCYTGTRSNEMKSKSFRDDKRKTSDDMPCMPSNIDLSEWDQTSISSNSSRTRSRSTRASSTGGRFLSRFSLIPGNISFRLSRTTSLGSSRSCHASSTTMSIFNNEDDRSLHPGPTGSLVNRNETRQSDSSGNLQGNPSSSSRQNAVRDGNGSCEGLDLNLFSSRIHAETENIEGRQNGAREPVERNFRYSRTLSVGRLRNRVLRQSAFSDVSFCPRQQEREARDTREDNERQAGEGDSRVLPSFSNAINSSSMSGYPPSSISNSLFNIQDYEVENSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGHCTCRIGSRDTSSIDDTGTRASISRIVMLAEALFEVLDEIHQQSAVLSSRPSVSSIGSVPAPNDVVESLPVKTYTKLHKHQEDAAQCYICLVEYEDGDSIRELPCHHQFHRTCIDKWLKEIHRVCPLCRRDICISDSLSMEN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2426g00014 533 MobiDBLite consensus disorder prediction 173 206 - -
Pral2426g00014 533 FunFam Putative RING zinc finger domain superfamily protein 447 525 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 1 22 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 69 120 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 274 293 - -
Pral2426g00014 533 Pfam Ring finger domain 477 520 IPR001841 -
Pral2426g00014 533 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 441 525 IPR013083 -
Pral2426g00014 533 SUPERFAMILY RING/U-box 456 526 - -
Pral2426g00014 533 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 532 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 144 163 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 69 84 - -
Pral2426g00014 533 ProSiteProfiles Zinc finger RING-type profile. 478 520 IPR001841 -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 144 207 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 272 301 - -
Pral2426g00014 533 SMART ring_2 478 519 IPR001841 -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 1 30 - -
Pral2426g00014 533 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2426g00014 Pral-Chr2426 98804 104047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2426g00014 72 527 C3H Transcription Factor Family AT5G45290 50.424 2.58e-116 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2426g00014 - - gmx:100815830 657.136